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berkeley_reactor_200306_biofilm_scaffold_86407_6

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 2078..4546

Top 3 Functional Annotations

Value Algorithm Source
Conjugation system ATPase, TraG family n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YHE9_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 815.0
  • Bit_score: 1182
  • Evalue 0.0
Conjugation system ATPase, TraG family {ECO:0000313|EMBL:EHQ25483.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 815.0
  • Bit_score: 1182
  • Evalue 0.0
type IV secretory pathway VirB4 components-like protein similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 818.0
  • Bit_score: 1164
  • Evalue 0.0

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Taxonomy

Mucilaginibacter paludis → Mucilaginibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2469
GTGAAAACGCATAAAACGCTCGAAAAACTCCTGCCCATCTTTAAGGTCGAACAAGATTGCATCCTGTCCCGCCTCGGCGACATTACCCTGGCCTATGAGCTCACGCTGCCAGAGATATTCACGCTATCCACCGATGATTTCGAGGCCCTCCATCAGGCCTGGCTCAAGGCCATCCGTGTGCTACCAAACCATACCGTCCTACACAAACAGGACTGGTTCATGGAAAGCCGCTACCGTGCCGACTTTTCCAACCCGGACCAATCCTTTTTGGCCCGCAGCAGCGAACGCTTCTTTCATGAACGACCCTACCTCGATCATCACTGCTACCTTTTCCTCTGCCAAAAGCCAGAAGGGCGCCGTCCGTCGAGTGCCCTTCTTTCCACCCTGATCCGGCCGACCCTGGTACCGACCTCCGCTCAAGACACCAAGCGCTGGAACCTGTTTCTCGACAAAGCCGGGCAGTTCTCCCGCATCCTCCAGGAGTCCGGTTATATTCAGCTACGGAGGATGACTGGCGACGAACTCGCCAGCACGGCCGATCAACCTGGGCTCCTGGAGCGGTATTGCTATCTCCTGCATCCCCAGGACGCCCCCGTTATCCGCGACCTTGAGCTAGGGCCCGACCTCAGGATTGGCGACCTACAGTGCCAAATATTCAGTCTCGCCGATGTCGAGGATCTTCCCGCCCTATGCGGGCCCCGCGTGAACTACGACAAATACAGCACCGATCGCACCAAATTCAGCGTCAGCTTTGCCGCACCACTCGGCCAGCTACTACCTTGCAACCATCTTTACAACCAATATATTTTCATCGAGGATTCCCGCGAAACCCTCAAAAAGATGGAGGCTCGACGGCTCCGCCTCCAGTCCTTATCCGCTTACTCGCGGGAGAATGCCATCAGTCGCGATGCCACCAATGATTTTCTCAACGAAGCGATCGGTCGACAGCGCCTCCCAGTCAAGGCCCACTTTAATCTCCTTACTTGGTCCGCTGATCCTGCGCAAGCTAAAGAAATGAAAAACATCGTCTCCGCTGCCCTTGCCCAGATGGATGCCCGTACCCGGCAGGAAACCGTCAGCGCGCCCCAGCTCTTCTGGGCTGGAATGCCCGGCAACGCTGCCGACCTCCCTATGCATGAGACCTTCGATACTTTTGCCGAGCAGGCGGCCTGCTTCCTTAATATCGAGACCAACTATCGCACCTCCATTTCGCCAGTAGGCCTCCGTCTCGGGGAACGGCTCAATGGCAGGCCGTTACATGTCGATATTTCCGACGAACCTATGGCCAGGGGAATTTGCACCAACCGCAACAAATTCATCCTCGGCCCCAGTGGAAGCGGCAAAAGCTTCTTCACCAATTTATTCGTCCGCAGCTACGTAGAACAGGGCGCCCACGCCGTCATAATCGACGTTGGCCACAGCTATCGCGGACTATGCGAATTGCTGGACGGCTACTACTTCACTTACTCAGAATCCGACCCAATCCGCTTCAACCCTTTCTTCCTTGGCGAAGAGCAGCTTGATACAGAAAAGAAAGAGTCGATCAAAACACTTCTCCTCGCACTCTGGAAAAAGGATGATGAAACCTTCAGCAGGTCCGAATACGTGTCGCTTTCCAACGCGCTCCAGGCATATTTCGACTACCTGAAGCAACACCCAGACATTTTCCCTTGCTTCGATAGCTTCTATGAGTACCTCCGGGATCAATTCCTCGTCACCCTTAGGAAGTCCGGCATCAAGGATAAAGACTTCGATATCGATAACTTTCTTTATGTGCTTAAACCATACTATGCCGGTGGCGAATATGACTATCTGCTGAACGCTCGCGAGAACCTTAACCTTCTTGACCAGCCTATGGTCGTCATAGAAATTGACGCGATCAAAGACCATCCGATTTTATTTCCGGTCACGACGATCATCACGATGCAGCTATTCATCGACAAGATGAGGAAACTAAGGGGTGTGCGCAAGATCATACTGATTGAGGAGGCCTGGAAGGCCATCATGCGCCAGGGCATGGCCGAATATGTGAAATATCTTTTCAAAACTGTCCGAAAATTCTACGGCGAAGCTATTGTTGTTACGCAAGAAGTTGAAGATATTATCTCCAGCCCGATCGTCAAGCAGGCTATAATCAACAACAGCGACTGTAAGATTCTACTCGATCAATCCAAATACCAAAACAAATTTGACCAAATACAGGAAATGCTTGGCCTCACGGAGAAGGAAAAAGCGCTGGTACTTTCCGTTAATAAATCCAACGATCCCAAACGAAAATATAAAGAGGTCTTTATTTCCCTCGGGGGCATGGTTAGCAAGGTCTACCGGACTGAGGTCTCGCTGGAAGAATACCTTGCTTACACCACTGAAGAAAAGGAAAAGATGCACGTCCAGGCTTATTCTAAAAAATACGGTAGCATCCGTCGCGGCATTGCAATGCTAGCACGCGATATGCGTGCGGCCTCATAA
PROTEIN sequence
Length: 823
VKTHKTLEKLLPIFKVEQDCILSRLGDITLAYELTLPEIFTLSTDDFEALHQAWLKAIRVLPNHTVLHKQDWFMESRYRADFSNPDQSFLARSSERFFHERPYLDHHCYLFLCQKPEGRRPSSALLSTLIRPTLVPTSAQDTKRWNLFLDKAGQFSRILQESGYIQLRRMTGDELASTADQPGLLERYCYLLHPQDAPVIRDLELGPDLRIGDLQCQIFSLADVEDLPALCGPRVNYDKYSTDRTKFSVSFAAPLGQLLPCNHLYNQYIFIEDSRETLKKMEARRLRLQSLSAYSRENAISRDATNDFLNEAIGRQRLPVKAHFNLLTWSADPAQAKEMKNIVSAALAQMDARTRQETVSAPQLFWAGMPGNAADLPMHETFDTFAEQAACFLNIETNYRTSISPVGLRLGERLNGRPLHVDISDEPMARGICTNRNKFILGPSGSGKSFFTNLFVRSYVEQGAHAVIIDVGHSYRGLCELLDGYYFTYSESDPIRFNPFFLGEEQLDTEKKESIKTLLLALWKKDDETFSRSEYVSLSNALQAYFDYLKQHPDIFPCFDSFYEYLRDQFLVTLRKSGIKDKDFDIDNFLYVLKPYYAGGEYDYLLNARENLNLLDQPMVVIEIDAIKDHPILFPVTTIITMQLFIDKMRKLRGVRKIILIEEAWKAIMRQGMAEYVKYLFKTVRKFYGEAIVVTQEVEDIISSPIVKQAIINNSDCKILLDQSKYQNKFDQIQEMLGLTEKEKALVLSVNKSNDPKRKYKEVFISLGGMVSKVYRTEVSLEEYLAYTTEEKEKMHVQAYSKKYGSIRRGIAMLARDMRAAS*