ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_140661_27

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(24141..25082)

Top 3 Functional Annotations

Value Algorithm Source
GumN family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEF9_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 278.0
  • Bit_score: 290
  • Evalue 1.50e-75
Uncharacterized protein {ECO:0000313|EMBL:KIC93752.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 285.0
  • Bit_score: 291
  • Evalue 1.20e-75
GumN family protein similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 278.0
  • Bit_score: 290
  • Evalue 4.20e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 942
ATGGACAAGAAGCGGTCGCGCCTGCTACAGCTTAAGCATGCGCCTGGAAGGATGAAGCAGACTTTTTTACTTGCTGCCGGTGTGCTGGCAAGCTGCCTGGCCTTTTCACAAACCCCTCATACATTGCTATGGCAGATCTCAGGCAAGGGGATGGAGAAGCCATCGTACCTGTTTGGAACGATGCACGTGCTGTGTGCGGACGACGCAAAATTGAGCGATAGCCTGCGTTTTGCCATTGGCAGCTGCGATGAGGTTTATTTTGAGATAGATCTCAGCGATATGATGGGGATGATGGGCGGTATAAAATACATGCGTATGAATGACAGCAAAAAGCTGTCCGACCTATTGCCGCCAAAGGATTATGACAGGGTAAAGACCTATTTCAATCAGCATACAAGCATGATACCGTTCAGTATGCTGGAGCGATTCAAACCGATGCTTGTCAGCGGGATCATCGAGCAGTCGAGCCTGGGTTGCGAAACGACGGATGGGATGGAGATGATGATCATGAAAGAACTGCGGGGAAAGAAGACAAATGGACTGGAGACGGTGCAATTCCAGGCGGGATTATTCGATAGCATACCGTATGAAGCACAGGCCAGGGACCTGTTGAATTATATCGATAGCAGCGATCAATACAAGAAAATGACCCAGGAGCTGGCGGAGGTATACCGGTCGCAGGACCTGGACCGGATCGATTCGCTCAGCAGGAAAGGCGATGCGGGGATGAGCAATTATATGGATTTGCTATTGTATGGGAGAAACAGGAACTGGGCACAGCAACTAGATGTGTTATTGCCTAAGAAATCATTGCTGATAGCGGTAGGTGCGGCACATCTGCCGGGAAAAGGCGGTGTTATCGATCTGCTGAGGAAAGCGGGGTATACGGTCAGGCCGATGCAAAATCTGCAGGCCGGTCCGGGTGAGACGGCGAAGAACTGA
PROTEIN sequence
Length: 314
MDKKRSRLLQLKHAPGRMKQTFLLAAGVLASCLAFSQTPHTLLWQISGKGMEKPSYLFGTMHVLCADDAKLSDSLRFAIGSCDEVYFEIDLSDMMGMMGGIKYMRMNDSKKLSDLLPPKDYDRVKTYFNQHTSMIPFSMLERFKPMLVSGIIEQSSLGCETTDGMEMMIMKELRGKKTNGLETVQFQAGLFDSIPYEAQARDLLNYIDSSDQYKKMTQELAEVYRSQDLDRIDSLSRKGDAGMSNYMDLLLYGRNRNWAQQLDVLLPKKSLLIAVGAAHLPGKGGVIDLLRKAGYTVRPMQNLQAGPGETAKN*