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berkeley_reactor_200306_biofilm_scaffold_159982_26

Organism: 2019_SCN_bioreactor_200211_biofilm_Sphingobacteriia_51_13

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 32141..34036

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH04_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 630.0
  • Bit_score: 989
  • Evalue 1.30e-285
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 630.0
  • Bit_score: 989
  • Evalue 3.80e-286
ABC transporter related protein {ECO:0000313|EMBL:AEW00615.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 630.0
  • Bit_score: 989
  • Evalue 1.90e-285

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1896
ATGCATTATGTCTCTGTCGAAGGTTTGACCAAATCGTACGGCGTCAAACCCCTGTTTGGCAATATCAGCTTTCATATAGAAGAGGGGGATAAGATAGCCCTGGTAGCCAGAAATGGCAGCGGGAAGTCTACCCTTTTGAAGATCCTGGCCGGCAAGGAAACAGCCGACAGCGGTACCGTATGGATCCATAAGGATGTGACGGTGGCGTTGTTCGAGCAGGAGCCTGTGTTCATAGAGGACCGAAGCATCCTGGATAATATCTTCCACCATAATCATCCTGTCATCAATGCCATCCGGGAGTACGAACGGGCCAGCGAGACGGGCGATGTGGACCTGCTGACGGACGCCATCGTAAAACTGGATGAGCTGAATGCCTGGGATTTCGATACCAAGGTCAAGCAGATTCTGGGCAAGCTGAACATCCATCATTTGCAACAGACGGCGGGCACTTTATCCGGTGGCCAGCGGAAACGGGTGGCCCTTGCCAAGACCCTTATCGACATCGGATTCGAGCATAAGCACGTGCTGCTGATCATGGATGAGCCCACCAACCACCTGGATGTGGAGATGGTGGAATGGCTCGAGCACTATCTCAACCAGGAAAAAGTGACGCTGCTGCTGGTCACCCACGACCGGTATTTTCTTGACAATGTCTGTAATGAGGTTTGGGAGATGGACGGCAGCGACATGCATACCTATAAAGGCGACTACGAAAATTACCTGGAGAAGAAGGCTGCCCGTATGGAGAATGAGACCTCCAGCATCGAGAAGGCCCGCAATACCTATCGAAAAGAGCTGGAGTGGATGCGTAAGCAGCCGAAAGCCCGTACTACCAAGAGCAAGAGCCGACAGGATAATTTTTATGTAGTGGAGGCAAAAGCCAAACAGCGCATCGAAGACCAGCAGGTAGAGCTGCAGGTAAAGATGAACCGGCTGGGCGGCAAGATCGCCGAGCTGAAAAAAGTCTACAAAAGCTTTGGCGACAAGGTTATCCTGAAGGGTTTCGACTATACTTTTAAAAGAGGTGAGCGCCTGGGTGTCGTAGGTAAGAATGGCGCCGGCAAATCCACCTTTATCAATATTCTGCAGGGTATCGAACAGCCAGACAGCGGTAAGGTGAATATCGGAGAAACGGTGATCTTCGGCAACTATTCGCAGCAAGGGCTCGTCATCAAGGAAGATGTGCGGGTGATCGAATATGTCAAGAACATTGCAGAAGTATTTCCCCTGGCTTCCGGCGGGTCACTCAGCGCCTCACAATTCCTTAATCTTTTCTTATTTCCACCCGAGCAGCAATACACCTATATTTCCAAGCTAAGTGGTGGTGAAAAGCGCAGGCTTCATCTCCTTTCCATTCTTTTCCGCAATCCGAACTTCCTGGTGCTGGATGAGCCCACCAATGACCTGGACCTCCCTACCCTGGCCGTACTGGAGAATTTCCTCAGCGACTTCCAGGGATGCCTGCTGATCGTATCGCATGACCGGTATTTTATGGACAGGCTGGTGGATCATCTGCTGGTGCTGGAAGGCGATGGCGTAGTGCGTGATTTCCCGGGCAATTATTCGCAGTATCGTGCTGCTCAGCGTGATAGTCCGGAACCGGTGGGAAATGAGATCATGCCTTCGAAGGAGCCGGCACCTGCCGTGGAGTCCGCGCCGGCGGCGCCGCCCGCGAAAAAAAGGACATTATCATATAAGGAGAAGCGGGAGCTCGAAGGGCTGGATAAGGAGATCGCGCAGCTGACGCAGGAGAAGAAGGATGTAACGGAGAAGCTCAATGGCGGGACTACTCCGTTTGACGAGTTGCAGCGGCTGTCGGTGCGTATAGGAGAGATCGATCAGCTGCTGGATGAGAAGGAGATGCGCTGGCTGGAATTGAGCGAAGCGGAAAGTTAA
PROTEIN sequence
Length: 632
MHYVSVEGLTKSYGVKPLFGNISFHIEEGDKIALVARNGSGKSTLLKILAGKETADSGTVWIHKDVTVALFEQEPVFIEDRSILDNIFHHNHPVINAIREYERASETGDVDLLTDAIVKLDELNAWDFDTKVKQILGKLNIHHLQQTAGTLSGGQRKRVALAKTLIDIGFEHKHVLLIMDEPTNHLDVEMVEWLEHYLNQEKVTLLLVTHDRYFLDNVCNEVWEMDGSDMHTYKGDYENYLEKKAARMENETSSIEKARNTYRKELEWMRKQPKARTTKSKSRQDNFYVVEAKAKQRIEDQQVELQVKMNRLGGKIAELKKVYKSFGDKVILKGFDYTFKRGERLGVVGKNGAGKSTFINILQGIEQPDSGKVNIGETVIFGNYSQQGLVIKEDVRVIEYVKNIAEVFPLASGGSLSASQFLNLFLFPPEQQYTYISKLSGGEKRRLHLLSILFRNPNFLVLDEPTNDLDLPTLAVLENFLSDFQGCLLIVSHDRYFMDRLVDHLLVLEGDGVVRDFPGNYSQYRAAQRDSPEPVGNEIMPSKEPAPAVESAPAAPPAKKRTLSYKEKRELEGLDKEIAQLTQEKKDVTEKLNGGTTPFDELQRLSVRIGEIDQLLDEKEMRWLELSEAES*