ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_2495_1

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 2..313

Top 3 Functional Annotations

Value Algorithm Source
putative sugar ABC transporter ATP-binding protein (EC:3.6.3.17) similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 103.0
  • Bit_score: 188
  • Evalue 7.30e-46
ABC transporter ATP-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003649CAE similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 103.0
  • Bit_score: 188
  • Evalue 2.60e-45
Putative sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:EGE61230.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 103.0
  • Bit_score: 188
  • Evalue 3.60e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATCGCCCGGGCGGTGTATTTCGGGGCCAAGGTGCTGATCCTGGACGAGCCGACCTCGGCGCTGGGGGTGGCGCAGACCTCGATGGTGCTGAAATATATCCACCAGGTGCGCCAGAACGGGCTGGGGGTGATCTTCATCACTCACAACGTCCGGCACGCCTATGCGGTGGGCGACCGCTTCACGGTGCTCAACCGCGGCAAGACGCTCGGCACCTATGCCAAGGCCGAGATCCCGATGGACGAGCTGCAGAACCTGATGGCCGGCGGCAAGGAGCTGGCCCAGCTCTCCAGCGAGCTGGGCGGCACCGTCTGA
PROTEIN sequence
Length: 104
IARAVYFGAKVLILDEPTSALGVAQTSMVLKYIHQVRQNGLGVIFITHNVRHAYAVGDRFTVLNRGKTLGTYAKAEIPMDELQNLMAGGKELAQLSSELGGTV*