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berkeley_reactor_200306_biofilm_scaffold_12255_14

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(10557..11879)

Top 3 Functional Annotations

Value Algorithm Source
Putative periplasmic binding protein ABC transporter protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UZ72_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 430.0
  • Bit_score: 449
  • Evalue 3.50e-123
Putative periplasmic binding protein ABC transporter protein {ECO:0000313|EMBL:ENN84127.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 430.0
  • Bit_score: 449
  • Evalue 4.90e-123
putative sugar ABC transporter, substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 430.0
  • Bit_score: 442
  • Evalue 1.20e-121

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1323
ATGATGAGATCGGAAGGTTCGGATTGCGGGGCCGAGCGCAGGGGGGCGCTGTCGAAGACGGTCCTGGCGCGTCTGGTCGGCGCGGTGCTCGGCGGCGCGGCGCTGGCGATGCCGGCGAGCCTGCCGGCCCTGGCCGAGACCACCATCCGCCTGGCCCATGTCGAGACCATTCCCGGCGCGGTGAAGATCTGGCAGCAGGCCGCCCGCGACTTCGAGCAGCAGCATCCCGGGGTCAAGGTCGAGGTCAACTACCTCGAGAACGAGGCCTACAAGGCCAAGCTGCCGACCATGCTGCAATCGGCCGACCGGCCGCAGATCATCTACAGCTGGTCGGGCGGCGTGATGCGGGCCCAGGAGCGCGCCGGCTATCTCCAGGACGTCACCGCCGCCGCGGCGCCGGGGCTGGAGCGGTTTTCCGGGCCGGCGGTCAGGGCCTTCCAGATCGACGGCAAGACCTATGGCCTGCCGCTGCAGCTCAGCGAGGTCGTGTTCTTCTACAACAAGGCGCTGTTCGCCAAGGCCGGCGTCGACGCCGGCAAGATCAGGACCTGGGACGACTTCCTCGCCGCGGTGAAGACGCTCAAGGCCGCCGGCATCACGCCGATCATCGTCGGCGGCGGCGAGAAATGGCCTATGCATTTCTACTGGTCCTACCTGATGATGCGCATCGGCGGCGCGCAGGCCCTGGCCGATGCCACCGCCGGCAAGGACGGCGGCTTCAACAACCCGGTCTTCGTCGAGGCGGGCAAGCGGCTGCGCGAGCTCGCGGCGCTCGATCCCTTCCAGCCCGGCTATCTCCAGACCACCCACCTGCAGGCGGCAGGCCTGTGGGGCGACGGCAAAGGCGCGATCCAGCTCATGGGCAGCTGGCTGCTCGGCACCCAGGCCAACAACGCCGCCGACGGCAAGGGCCTTTCCAAGGACAATATCGGCATCCTGAGCTTCCCCGCCTTGGCCGGCGGCAAGGGCGCGCCGACCGACACGCTCGGCGGCATCAACGGCTGGCTGATCACCAAGGATGCGCCGAAGGAGGCCTTCGACTTCGCCGCCTTCCTGATGTCGGAGCCCTACCAGAAGCAGGCGGCCGCCGCCGGCGTCTACATCCCGGCCCTCAAGGGCGCCGAGGCCTGGATCGAGGACCCGCTGGTGAAGCGCATGGCGAGCGACATCGCCGCCTCCACCTATCACCAGATCTTCCTCGACCAGGACCTCGGCCCCTCCGTCGGCCGCGTCGTCAACGACATCTCCGTGGCGGTCGCCGCCGGCGAGATGACGCCCGAGGACGCCGCCGCCGCCATCCAGCAGGCCTGGGACGAGAAGTAG
PROTEIN sequence
Length: 441
MMRSEGSDCGAERRGALSKTVLARLVGAVLGGAALAMPASLPALAETTIRLAHVETIPGAVKIWQQAARDFEQQHPGVKVEVNYLENEAYKAKLPTMLQSADRPQIIYSWSGGVMRAQERAGYLQDVTAAAAPGLERFSGPAVRAFQIDGKTYGLPLQLSEVVFFYNKALFAKAGVDAGKIRTWDDFLAAVKTLKAAGITPIIVGGGEKWPMHFYWSYLMMRIGGAQALADATAGKDGGFNNPVFVEAGKRLRELAALDPFQPGYLQTTHLQAAGLWGDGKGAIQLMGSWLLGTQANNAADGKGLSKDNIGILSFPALAGGKGAPTDTLGGINGWLITKDAPKEAFDFAAFLMSEPYQKQAAAAGVYIPALKGAEAWIEDPLVKRMASDIAASTYHQIFLDQDLGPSVGRVVNDISVAVAAGEMTPEDAAAAIQQAWDEK*