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berkeley_reactor_200306_biofilm_scaffold_12255_40

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(37172..38200)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YAR0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 340.0
  • Bit_score: 490
  • Evalue 8.10e-136
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:ETA72034.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 340.0
  • Bit_score: 491
  • Evalue 8.70e-136
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.0
  • Coverage: 340.0
  • Bit_score: 490
  • Evalue 3.90e-136

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Taxonomy

Mesorhizobium loti → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
ATGGGGCGTCCGACGATTCGCGATCTCGCTATGGCCGCAGACGTCTCCGTGGCCACCGTCAACCGCGTGCTCGCCGGCAGCGGCCATGTGCGGCCGCCGACGATGCAGCGCGTCATGGCCGCGGCGGAGGCGATCGGCTTCTACGGCATCGGCGCGATCCACAGCCGTGTCGCGGCGGCGCGTGCCAAATACCGCTTCGGCTTCCTGCTGCACCAGCCCTCGCGCGCCTTCTACCAGAACCTTGCCGCGGCGCTGCGCGCGGCAGCGGGGCGCATGCAGGATTGCGAGATCGATGCGCGCATCGAGTTCCTCGACGACCTGTCGCCGGAGACGACGGCCGCGCACATGGTCGCGCTCGGCCGGGACTGCGACGCCCTCGGCGTCGTGGCTGCCGTCCATCCGCTGGTGACGCAGGCGATCGAAGCGCTGCAGGAGCAGGGCAAGCCGGTCTTCTCGCTGGTCTCGCAGCTTTCGGCCACCGGGGAGGTCCACTATGTCGGCCTCGACGCCTGGAAGGTCGGCCGCACCGCCGCCTGGGCCGTCCATCACCTCTGCAAGGGCCCGGGCAAGCTCGGCATCCTGGTCGGCAACCACCGCTACCGCTGCCAGGAGATGAACGAGAGCGGCTTCCGCTCCTATTTCCGCGAGCACGCTCCGGACTTCACCCTGCTCGAGCCGCTCTCCACTTTCGAGACGCGGGCCGTCGCCCAGGAGATGACGGAAAGGCTCTTGCGCGAGCATTCCGACCTCGCCGCCCTCTATGTCGCCGGCGGCGGCATCTCCGGCGCCCTCGCCGGCCTGCGCGCCAGCGGCCGGGCGGGCGGCCTCGTCGTGGTCGGCTACGAGCTCATGGACATCACCCGCGCCGCCCTGCTCGACCGGACGCTCACCTTCGTCATTTCCCATCCGCTCGAACGGCTGGCCGATGCGGCGATGGCCGGCATGGTCCGCGCCGCCGAGGCCGGGCCGGGCGGGGGCAGCTACACCAGCGTCCTGCCCTTCGAGATCTACACGGCGGAGAATATTTAG
PROTEIN sequence
Length: 343
MGRPTIRDLAMAADVSVATVNRVLAGSGHVRPPTMQRVMAAAEAIGFYGIGAIHSRVAAARAKYRFGFLLHQPSRAFYQNLAAALRAAAGRMQDCEIDARIEFLDDLSPETTAAHMVALGRDCDALGVVAAVHPLVTQAIEALQEQGKPVFSLVSQLSATGEVHYVGLDAWKVGRTAAWAVHHLCKGPGKLGILVGNHRYRCQEMNESGFRSYFREHAPDFTLLEPLSTFETRAVAQEMTERLLREHSDLAALYVAGGGISGALAGLRASGRAGGLVVVGYELMDITRAALLDRTLTFVISHPLERLADAAMAGMVRAAEAGPGGGSYTSVLPFEIYTAENI*