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berkeley_reactor_200306_biofilm_scaffold_12255_43

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 40834..41904

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, permease protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q985L1_RHILO similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 355.0
  • Bit_score: 539
  • Evalue 1.60e-150
Monosaccharide ABC transporter membrane protein, CUT2 family {ECO:0000313|EMBL:ETA72037.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 355.0
  • Bit_score: 540
  • Evalue 1.70e-150
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 355.0
  • Bit_score: 539
  • Evalue 4.50e-151

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Taxonomy

Mesorhizobium loti → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1071
ATGACCTCCACGACCCTTCACCGATCTTCCCAGGATGCGGCGGCTCCACCGGCCCCACGCGCCTCGGGATATGCACTCGGCGCCCTGCTGCGGCGCCCCGAGACCGGCTCGCTCATCGGCCTCGTCGCCGTCTTCGCCTTCTTCGCCGTGTTCGGCGGGCAGACCTTCCTGTCCTCCGGCGGGGCGGCGAGCTGGCTCAACGTCGCCTCCGAGCTCGGCATCATCGCCCTGCCGGTCGGGCTCCTGATAATCGCCGGACAGCTCGACCTCTCCGTCGGCTCGGTGCTGCCGGCGAGCTCGATGACCGTCGCCATCGTCTCGGGCTTCTACCAGGCGCCGATCGCGGTCGGCATCGCCGCGGCGCTGGTCCTCGGCCTCGGCGTCGGCTTCCTCAACGGGCTCCTGGTGGTGCGCACCAGGCTTCCCTCCTTCGTCGTCACCCTGGCGACGCTGTTCGCCGTGGCGGGCCTCACCCTCGGCCTTTCGGTGATCCTGACCGGCAGCACCAGCGTCGCCTTGAAGAGCCCGCGCCTCGCCAAGCTGCTGCTCGGCGACTTCGTCGGCGGCAAGTTCCAGGTGTCGCTGTTCTGGTGGCTGGGCGCCGTCGTGGTGGTCGGCTTCGTCCTCAACTTCACGCGCTACGGCAACTGGATCCTCGCCGTCGGCGGCGATCCCGTCAGCGCCCGCAATGCCGGCATCCCGACCGAGCGCCTCACCATCGCGCTGTTCATGGGCAGCGGCCTCAGCGCCGCCTTCGTCGGGCTCTCCCAGGCGATCCTCTACAACAGCGCCCAGGTCGCCGCCGGCCAGTCCTTCATCTTCAACTCGATCATCGCCGTGGTGATCGGCGGCGTGATGCTCACCGGCGGCTACGGCTCGGTGATCGGCATCGTGCTCGGCACGCTGACCTTCTCGATCGTCAACCAGGGCATCTTCTACACCGGCTTCGACGCCAACTGGGCCAGCCTGATCATCGGCATCCTCCTGCTGCTCGCGGTGCTGATGAACAATACGTTCCGCGCCATGGCCCTGACCTACGGACCGCGCCGGAACGGGAGGCCCCGCCGATGA
PROTEIN sequence
Length: 357
MTSTTLHRSSQDAAAPPAPRASGYALGALLRRPETGSLIGLVAVFAFFAVFGGQTFLSSGGAASWLNVASELGIIALPVGLLIIAGQLDLSVGSVLPASSMTVAIVSGFYQAPIAVGIAAALVLGLGVGFLNGLLVVRTRLPSFVVTLATLFAVAGLTLGLSVILTGSTSVALKSPRLAKLLLGDFVGGKFQVSLFWWLGAVVVVGFVLNFTRYGNWILAVGGDPVSARNAGIPTERLTIALFMGSGLSAAFVGLSQAILYNSAQVAAGQSFIFNSIIAVVIGGVMLTGGYGSVIGIVLGTLTFSIVNQGIFYTGFDANWASLIIGILLLLAVLMNNTFRAMALTYGPRRNGRPRR*