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berkeley_reactor_200306_biofilm_scaffold_12255_46

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 43143..43925

Top 3 Functional Annotations

Value Algorithm Source
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 260.0
  • Bit_score: 429
  • Evalue 2.40e-117
Hydroxypyruvate isomerase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y4W3_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 260.0
  • Bit_score: 429
  • Evalue 1.70e-117
xylose isomerase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 260.0
  • Bit_score: 429
  • Evalue 4.80e-118

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Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGTCACAAGACTTCGCCCTCGCCGCCTGCGCCGAGATGCTCTGGCAGGACCGCCCGATGGACTGGCGCCTCAGGCGCCTGACCGAGATGGGCTTTGCCTGCGGCATCTGGAGCTGGACCGCGCACGACCTCGGCATGCTGGAGCGCTCGGGGGCGGCCTTCTCCTCGATGACCGGCTATATCTCGGGCCGCCTCGCCGACGAGGCCGGCGCCGCCGAGCTCATCGCCACCGCCCGGCAGTCGATCGAGGTCGGCAAGCGGCTGAACGTCGCGCGCCTCAACCTGCACGGCACCGGGCTCGGCGAAGGCGGCCTGCCGGTCACGCCCTGCGAGACCGTCACCGGCGCCATGTGGCTCAAGGCCCGCGACACGCTGAATCGCATCGCCGACCTCGCCGACGAGCACGGCGTCACCTTCATGATCGAGAACCTGAACCTGCCGGTCGACCATCCCGGCGTGCCCTTCGCCCGGATCGAGGACACGCTGGCGCTGGTCTCCGCGGTCGACCGCCCGGGCCTCCGGCTCAATCTCGACCTCTATCACGTGCAGATCGGCGAGGGGAACCTGATCGCATGGTGCCGGCGCTGCCTGCCCTTCATCGGCGAGATCCAGGTGGCCGACGTGCCCGGGCGCCAGGAGCCGGGCACGGGCGAGATCAACTATGCCGGCGTCGCCCGCGCGCTCGATGCCATGGGCTATCGCGGCCCGGTCTGCCTGGAGGCCTTCGCCTCGGGCGAGCCGGAGGCGGCGCTCGAAGCCTTCCGGGCCGCCTTCACGCTCTGA
PROTEIN sequence
Length: 261
MSQDFALAACAEMLWQDRPMDWRLRRLTEMGFACGIWSWTAHDLGMLERSGAAFSSMTGYISGRLADEAGAAELIATARQSIEVGKRLNVARLNLHGTGLGEGGLPVTPCETVTGAMWLKARDTLNRIADLADEHGVTFMIENLNLPVDHPGVPFARIEDTLALVSAVDRPGLRLNLDLYHVQIGEGNLIAWCRRCLPFIGEIQVADVPGRQEPGTGEINYAGVARALDAMGYRGPVCLEAFASGEPEAALEAFRAAFTL*