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berkeley_reactor_200306_biofilm_scaffold_12255_48

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(45440..46357)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DF73_BRAJP similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 292.0
  • Bit_score: 386
  • Evalue 1.90e-104
LysR family transcriptional regulator {ECO:0000313|EMBL:KGT79167.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 292.0
  • Bit_score: 401
  • Evalue 8.10e-109
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 292.0
  • Bit_score: 386
  • Evalue 5.40e-105

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Taxonomy

Bradyrhizobium japonicum → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGGCGCAGGCTTTTGTGATAGCTTTTGGCGATACCGGCATGGAGCTGCGTCACATCCGCTATTTCCTCGCCGTGGCGGAGGAGCAGAATTTTACCCGCGCCGCCGCCCGCGTCGGCATCGGCCAGCCGCCGCTCAGCCAGCAGATCCGCGACCTCGAGGCCGAGGTCGGCGCGCCGCTGTTCCACCGCGTGCCGCATGGGGCCGAGCTGACCGAAGCCGGCCGCGCCTTCCTGGAAGCCGCGCGCCCGCTGCCCCTGCAGGCCGAGCAGGCCCTCCTCGCGGCGCGGCGGGCGGGGCGCGGCGAGACCGGGGCGCTCCGGGTCGGCTTCACCGGCTCGGCCCCGTTCAACCCGGTGGTCACCGCGGCGATCCGCGCCTTTCGCCGCGCTTTTCCCGAGGTCGAGCTGACGCTGGAGGAGGCCAACACCACCCGCCTGGTCGCGGCGCTGCGCGAGGGCGCGGTCGACGCGGTGTTCCTGCGCTCGCGCGCGGTGGCGGGCGAGGATCTGCAGCTGCGCCACCTGCCGGAGGAGCCGATGCTGGCGGCGCTGCCGGCCGGCCATCCCGCGGCGGCACGAGGGGCCGTCGACTTGGCGCTGCTCCGGGAGGACGCGTTCATCCTGACGCCCCGCGCGGTCGGGCCGACCCTCTACGACACGGTGATCGCCGCCTGCCGCCGGGCCGGCTTCGAGCCGATCCTCGGCCAGGCGGCGCCGCAGATGAGCTCGGTGGTCAACCTGGTGGCGGCCGAGCTCGGCGTCTCGCTCGTCCCGGCCTCGATGCGCCAGCTCCAGGTCATCGGCGTCGCCTACCGCCCGATCGCGGGCGAGGCGCCGATGGCGCAGCTCTCGCTCGCCAGCCGGCGCGGCGAGCGCTCGGTGCTGGTCCGCAATTTTATCGCGTGGGCGGGGGCGTGA
PROTEIN sequence
Length: 306
MAQAFVIAFGDTGMELRHIRYFLAVAEEQNFTRAAARVGIGQPPLSQQIRDLEAEVGAPLFHRVPHGAELTEAGRAFLEAARPLPLQAEQALLAARRAGRGETGALRVGFTGSAPFNPVVTAAIRAFRRAFPEVELTLEEANTTRLVAALREGAVDAVFLRSRAVAGEDLQLRHLPEEPMLAALPAGHPAAARGAVDLALLREDAFILTPRAVGPTLYDTVIAACRRAGFEPILGQAAPQMSSVVNLVAAELGVSLVPASMRQLQVIGVAYRPIAGEAPMAQLSLASRRGERSVLVRNFIAWAGA*