ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_12255_55

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 52025..53191

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TC75_MESCW similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 359.0
  • Bit_score: 435
  • Evalue 4.60e-119
Phosphonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM34959.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 383.0
  • Bit_score: 451
  • Evalue 8.70e-124
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 359.0
  • Bit_score: 435
  • Evalue 1.30e-119

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1167
ATGTCCGCCGCTTTCGCCATGCCCGACGGCGCGCCGTCGCCCGGTGCACCCGGCGCACCGTCACCCGGCGCCGCGCCCATCGGGCACGGCATCCGCTTCGACAAGGTGTCGGTCGCCTATCGCGGCCTCACCGTGCTCGACACGCTGACGCTCGCGATCGAGCCCGGCGAGTTCGTGGCGCTGATCGGCCCGTCCGGCTCGGGCAAGACCACGGCGCTGCGGGCCGTGGCCGGCTTCGTGCGGCCGGCCTCCGGCCGCATCCGCATCGGCGAGACCGACGTCACCGACCTGCCGCCCTATGCCCGCGGCATCGGCATGGTGGTGCAGAACTACGCCCTGTTCCCGCACATGCGGGTCAGCGACAACGTCGCCTTCGGCCTCCACGCCCAGGGCGCGCCGAAGGACATCATCGCCGGGCGGGTGCAGGAATCCCTGCGCATGGTCGGCATGCAGGCCTATCTCACCCGCTTCCCGCGCGAGCTCTCCGGCGGCCAGCAGCAGCGCGTCGCCAGCGCCCGGGCGCTGGCCCTCCGTCCGCGCGTGCTGCTGCTCGACGAGCCGCTCTCCGCCCTCGACGCCCAGATCCGCCGCAACATGGTGGAGGAGCTGGCCAAGCTGCACCGCGACCTCGCCGGCCTCACCGTGCTCTACGTCACGCACGACCAGACCGAAGCGCTCACTCTGGCCGACCGCGTCGCCATCATGCGCGACGGCCGGCTCTGCGCGCTCGGCACCTCCACGGATCTCTACCGGCGCCCGCCCAACCGCTTCACGGCCGAGTTCCTGGGGCGCGCCAACCTGCTGCCCGTGACCGTCCAGGCGGTGGACGGCGCCGGCCGTGCCGAGGTCCGCTTCGGCGACAGGACCTTCCTGGCCAGCGCCCATGACCGGCTCGCGGCGGGCCAGGCCTGCCATCTCTGCATCCGGCCGCACGACCTCGCCCTGGCCAACGGCAAGGACGAGCCCAATCTCCTCCACGCCGACATGGTGAGCGCGCAGTGGCAGGGCGACTCGCACAGCCTCGTCGTCGCCGCGCAGGGCCACGAGCTGCGCATGCTCTCGGCTCCCCTCGACCACCCGCCGCGCCCGGGCGAGCGGCTCGCCCTGCGCTTCCCGGCCGAGCGGGCCAGCCTGATCGCCGAGGAGGCGGGCCATGCCGGCGGATAG
PROTEIN sequence
Length: 389
MSAAFAMPDGAPSPGAPGAPSPGAAPIGHGIRFDKVSVAYRGLTVLDTLTLAIEPGEFVALIGPSGSGKTTALRAVAGFVRPASGRIRIGETDVTDLPPYARGIGMVVQNYALFPHMRVSDNVAFGLHAQGAPKDIIAGRVQESLRMVGMQAYLTRFPRELSGGQQQRVASARALALRPRVLLLDEPLSALDAQIRRNMVEELAKLHRDLAGLTVLYVTHDQTEALTLADRVAIMRDGRLCALGTSTDLYRRPPNRFTAEFLGRANLLPVTVQAVDGAGRAEVRFGDRTFLASAHDRLAAGQACHLCIRPHDLALANGKDEPNLLHADMVSAQWQGDSHSLVVAAQGHELRMLSAPLDHPPRPGERLALRFPAERASLIAEEAGHAGG*