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berkeley_reactor_200306_biofilm_scaffold_12255_60

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 58934..59143

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B39E85 similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 69.0
  • Bit_score: 116
  • Evalue 6.40e-24
cspA-1; cold shock protein CspA 1 similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 69.0
  • Bit_score: 116
  • Evalue 1.80e-24
Cold shock protein CspA 1 {ECO:0000313|EMBL:AJD39972.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 69.0
  • Bit_score: 116
  • Evalue 9.00e-24

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Taxonomy

Rhizobium gallicum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGAGCACGGGTACCGTGAAGTGGTACAATGCCCGCAAGGGCTTTGGTTTTATTGCGCCGGACGATGGCAGCAAGGACGTGTTCGTTCACGTCAGCGCCCTCGAGCGTGCCGGCATGCAGGATCTCCGGGAAGGGCAGAAGATCGGCTATGAGCTGGTCCAGGATGCCCGGTCGGGCAAGACGTCCGCCGACCGGCTCCAGGCCGCCTGA
PROTEIN sequence
Length: 70
MSTGTVKWYNARKGFGFIAPDDGSKDVFVHVSALERAGMQDLREGQKIGYELVQDARSGKTSADRLQAA*