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berkeley_reactor_200306_biofilm_scaffold_12255_62

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(59776..60252)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, MarR family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A854_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 146.0
  • Bit_score: 166
  • Evalue 1.20e-38
Transcriptional regulator, MarR family {ECO:0000313|EMBL:KIG03131.1}; TaxID=870478 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MR1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 155.0
  • Bit_score: 167
  • Evalue 7.80e-39
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 146.0
  • Bit_score: 166
  • Evalue 3.50e-39

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Taxonomy

Burkholderia sp. MR1 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGACCGAACTCGACGTCCTGCGTTTTTCCCTGACGAGCGCTCTGCCCAAGGTCGGGCGGTACTGGCGCCGGACCGCGCGCGACCTGGTGCTCGCGCACGGCATTTCCGAGGCCTGCGCCATGCCCCTCATCAGCATCGGCCGGATGGGCGACGGCGTCCGCCAGGTGGCGGTGGCCGAGGAGATCGGCGTGGAGGGGCCGTCTCTCGTGCGCCTGCTCGACCAGCTCTGCGCCAGCGGCCTGGTCGAGCGCCGCGACGACGCGGCCGACCGGCGCGCCAAGACGCTCTGGCTGACGCCGGAGGGCCGGCGCATCACCGGCGAGATCGAGCGGGGGCTGGTGGTGCTGCGCGCCCAGGTGCTGCGCGACGTCGCCCGCGGCGACCTCGAGGCGACGCTGCGGGTGTTCCGCGCGTTCGAGGAGGCGGTCGGCCGGGCCCAGGAGGCGCCGCAGCAGCCGGGCGAGCCGGTCGCGTGA
PROTEIN sequence
Length: 159
MTELDVLRFSLTSALPKVGRYWRRTARDLVLAHGISEACAMPLISIGRMGDGVRQVAVAEEIGVEGPSLVRLLDQLCASGLVERRDDAADRRAKTLWLTPEGRRITGEIERGLVVLRAQVLRDVARGDLEATLRVFRAFEEAVGRAQEAPQQPGEPVA*