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berkeley_reactor_200306_biofilm_scaffold_12255_64

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 61876..62076

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237B0AC similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 64.0
  • Bit_score: 69
  • Evalue 1.10e-09
Uncharacterized protein {ECO:0000313|EMBL:CDP50080.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 67.0
  • Bit_score: 78
  • Evalue 2.60e-12
major facilitator transporter similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 64.0
  • Bit_score: 66
  • Evalue 2.70e-09

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Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 201
TTGATCCCGCCCGCAGCGCTCGCCGCCCTGCCGCCGGCCAACGCCGCCGTGATCACCGGCAAGGCGTTCTTCCCCGATCTCCTGTCGATCCCGTTCATGAGCGGCATCGGCATCGCCTTCGGCTTCTCCGCCGCGCTGTTCCTGGCCGCCGCAGCCGCGTCCTGGCTGGCGGGCGGACGCCAGCCGCACGCGGCGAGTTGA
PROTEIN sequence
Length: 67
LIPPAALAALPPANAAVITGKAFFPDLLSIPFMSGIGIAFGFSAALFLAAAAASWLAGGRQPHAAS*