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berkeley_reactor_200306_biofilm_scaffold_12255_81

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(81312..83465)

Top 3 Functional Annotations

Value Algorithm Source
glycoside hydrolase n=1 Tax=Nevskia ramosa RepID=UPI0003B40EF7 similarity UNIREF
DB: UNIREF100
  • Identity: 67.2
  • Coverage: 714.0
  • Bit_score: 956
  • Evalue 8.40e-276
Beta-glucosidase-like glycosyl hydrolase {ECO:0000313|EMBL:EJL78553.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.6
  • Coverage: 716.0
  • Bit_score: 944
  • Evalue 4.60e-272
glycoside hydrolase family 3 domain protein similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 713.0
  • Bit_score: 938
  • Evalue 6.70e-271

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2154
ATGAGTCGCGTGCAGTCGCTGATCGACGCGATGACGCTGCCGGAGAAGCTCGGCCAGCTCACCATGACCGCCAGCAGCTACGCGGTGACCGGTCCGGTGATCGCCGGCGATTCCACCGAGGCGATCAAGGCAGGCACCATCGGCAACCTGCTCAACCTGTACGGGCCGGGGCATGTCCGCGAGATGCAGCGCCTGGCCGTGGAGGAATCGCGCCTGCGCATCCCGCTGATGATCGGCTTCGACGTCATCCACGGCCACCGCACCGCCTTCCCGGTGCCGCTCGGCGAGGCCGCGCTGTTCGACCCGCGCGCCTGGGAGCTGACCGCCCGCGAGGCGGCGCGCGAGGCCGCCGCCGACGGGCTCGCCATGACCTTCGCCCCGATGCTGGACATTGCGCGCGATCCGCGCTGGGGCCGCATCGTCGAAGGGCCGGGCGAGGACCCCTGGGTCGGCGCGCTGATGGCCGATGCCAAGGTCCGCGGCTTCCAGGGCCCGGACCTCGCCGCCGTCGACGCGCTCGCCGCCGTCGCCAAGCACTATTGCGCCTACGCCCCGGTGACGGCGGGACGCGAATATGCCTCGGTCGACATTTCCGAGCGCACGCTGCGCGAGGTGCACCTGCCCCCGTTCGAGGCGGCGATCCGCGCCGGCGTGGCGGCGGTGATGCCGGCCTTCACCGACTTCGGCGGCGTGCCGATGACCGCCAACGCGTCGCTGCTGCGCGGCTGGCTGCGCCAGCGGCTCGGCTTCGACGGTGTCGTCGTCAGCGACTACAACGCCGTCGCCGAGCTGATCCATCACGGTGTCGCGGCCGACCTCGCCGAGGCGGCGGCCCTGGCGCTGCGGGCCGGCGTCGACATCGACATGATGGCCGACGCCTATCGCCGCGGCCTGCCGGTGGCGCTGGAGCGCCGCCTGGTGACGATGGCCGAGATCGACGAGGCGGTGGCGCGCGTGCTCACCCTCAAGGAGCGGCTCGGCCTGTTCGACGACCCCTACCACCGCGGCATGCAGCCGGAGGACGCCGCCACCCTGATCAACCGGCGCCGCATCGCCCGCGTCGTCGGCGCGCGCTCCCTCGTCCTGATGAAGAACGAGGGGGAGGCGCTGCCCATCCCCGCGGACGCCAGGCGCATCGCCCTGATCGGCCCGCTGGCCGATGCCGGCCCGGAGATGCGCGGGCCGTGGGGGGGCATTGCCGAGCCCGGCGACCAGGTGAGCGTGCTGGCGGGCCTGCGCGGCGCGCTGCCGGATGCGACGATCCTGCACGCCCCGGGCGTCGCCATCGACACGTCCGACGAGAGCGGCATTCCCGCCGCCCTCGACCTGTGCGACCAGGCCGACGCCATCCTGCTCTGCCTGGGCGAGGCGGCGGTCATGAGCGGCGAGGCGGCGAGCCGGGCCGATCCGGTGCTGCCCGGTCGCCAGCGCGCCCTGGCCGAGGCCGTGTTCGATCGGGCCGCCCGGCTCGGCAAGCGGGTCAGCGTCGTGCTGTTCTCCGGCCGGCCGCTGGTCGTGCCCGAGCTCGCCGACCGCGCCCATGCGCTGCTGGCGGCCTGGTTCCCCGGCGCCGAGGCCGGCAATGCCGTCGCCGACATCGTCACCGGCGCGCGCTCGCCGAGCGGCCGCACGCCGGTCTCCTGGCCCCGGGCGGTCGGCCAGATCCCGATCTTCTACGCCGAGCGGCCGACCGGCCGGCCCTTCGACGCCAAGGACCACTACACCAGCAAATATCTCGACGTCGCCAACACGCCGCTCTTCCCCTTCGGCCACGGCCTGACCTATGGCCGCTTCACCCTGTCGAACCTCACCGTGACGCCGGCCGTGGCCACGGAGCAGGACACGCTGGCGATCAGCGTCGACATCGCCAACGAAGGCACCATGGCGGCGGAGGAGACCGTGTTCCTGTTCACGCACGACACGGTGGCGAGCGTGGCGCGTCCGCTGATGGAGCTGAAGGGCTTCGACAAGATCGCCCTCGAGCCCGGTGCCCGCGGCACGGTGCATCTCAGCCTGCCGGCCACGGACCTGCGCTTCCTCGGCCTCGACCTCGAGCCGATCTTCGAGCCCGGAGAGATCGAGATCCTGGTCGGCCCGGCGGCGGATCGCACGCGGCTGCTGTCGAGGACGATCCAGCTCTCGACGGTGGAGTAG
PROTEIN sequence
Length: 718
MSRVQSLIDAMTLPEKLGQLTMTASSYAVTGPVIAGDSTEAIKAGTIGNLLNLYGPGHVREMQRLAVEESRLRIPLMIGFDVIHGHRTAFPVPLGEAALFDPRAWELTAREAAREAAADGLAMTFAPMLDIARDPRWGRIVEGPGEDPWVGALMADAKVRGFQGPDLAAVDALAAVAKHYCAYAPVTAGREYASVDISERTLREVHLPPFEAAIRAGVAAVMPAFTDFGGVPMTANASLLRGWLRQRLGFDGVVVSDYNAVAELIHHGVAADLAEAAALALRAGVDIDMMADAYRRGLPVALERRLVTMAEIDEAVARVLTLKERLGLFDDPYHRGMQPEDAATLINRRRIARVVGARSLVLMKNEGEALPIPADARRIALIGPLADAGPEMRGPWGGIAEPGDQVSVLAGLRGALPDATILHAPGVAIDTSDESGIPAALDLCDQADAILLCLGEAAVMSGEAASRADPVLPGRQRALAEAVFDRAARLGKRVSVVLFSGRPLVVPELADRAHALLAAWFPGAEAGNAVADIVTGARSPSGRTPVSWPRAVGQIPIFYAERPTGRPFDAKDHYTSKYLDVANTPLFPFGHGLTYGRFTLSNLTVTPAVATEQDTLAISVDIANEGTMAAEETVFLFTHDTVASVARPLMELKGFDKIALEPGARGTVHLSLPATDLRFLGLDLEPIFEPGEIEILVGPAADRTRLLSRTIQLSTVE*