ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_12255_92

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(95445..96323)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulatory protein n=3 Tax=Azotobacter vinelandii RepID=C1DGM3_AZOVD similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 289.0
  • Bit_score: 416
  • Evalue 1.30e-113
LysR family transcriptional regulatory protein similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 289.0
  • Bit_score: 416
  • Evalue 3.60e-114
LysR family transcriptional regulatory protein {ECO:0000313|EMBL:AGK21971.1}; TaxID=1283331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter vinelandii CA6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 289.0
  • Bit_score: 416
  • Evalue 1.80e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Azotobacter vinelandii → Azotobacter → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGCTCGATCTCACCGATCTCAGCCTGTTCCGCCATGTCGCCGAGGCCGGCAGCATCACGGCGGGCGCCGAGCGCGCCCATCTGGCGCTGGCTGCCGCCAGCGCCCGGGTGCGCGGCATGGAGGCGGTGCTCGGCACGCGCCTGTTCGACCGCAGCCGCCAGGGCGTGGCGCTGACCCCGGCCGGCCAGGCCCTGCTCGCCCATGCCCGTGACCTCATCGGCCGGGCGGAGCGGATGCACGAGGAGATGGGCGTCTTCGCCGGCGGCGCCGGCGGCCATGTCCGGCTCCTCGCCAACACCAACGCCCTGACCGAGTTCCTGCCCGAGGTGCTCGGCCGGTTCCTCGCCGCGGCGCCCGGCGTCACCATCGACCTGCAGGAGCGCGTCAGCGACGAGATCGTCGGCCTGGTGGCCGAGGGCGTCGCCGATATCGGCATCGTCGCCGGCACGGTCGAGACCGGGGCGCTGGAGACCTGCCCGTTCCGCGAGGACCGCTTCGTGCTGGTGGCGCCGCCGGATCACGCCCTGGCCGGGCGCGGCGCCGTCGCCTTCGCCGAGATCATGGAGCTCGATTTCGTCGGGCTCGACCGGGCGAGCGCCCTGCAGCGCTTCCTCGCCGGCCGAGCCGCGCGCCAGGGCGGGCGCCTGAGGCTCCGGGTGCAACTGCGCAGCTTCGACGCGGTCTGCCGCATGGTCGAGGCCGGCGTCGGCATCGGCATCGTGCCGGAGACCACGGCGCGCCGCGCCGCCCGGACCATGGCCATCGCGGTTCTGCCGCTCACCGACCCCTGGGCCTTGCGCGACCTCCGCCTCTGCCTGCGCAGCCGCGCGGCGCTGTCGGCGAGCGCGCGGCTGCTGGTGGAGCATCTGCTTCGGTAA
PROTEIN sequence
Length: 293
MLDLTDLSLFRHVAEAGSITAGAERAHLALAAASARVRGMEAVLGTRLFDRSRQGVALTPAGQALLAHARDLIGRAERMHEEMGVFAGGAGGHVRLLANTNALTEFLPEVLGRFLAAAPGVTIDLQERVSDEIVGLVAEGVADIGIVAGTVETGALETCPFREDRFVLVAPPDHALAGRGAVAFAEIMELDFVGLDRASALQRFLAGRAARQGGRLRLRVQLRSFDAVCRMVEAGVGIGIVPETTARRAARTMAIAVLPLTDPWALRDLRLCLRSRAALSASARLLVEHLLR*