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berkeley_reactor_200306_biofilm_scaffold_12255_121

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(126442..127056)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JJ44_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 198.0
  • Bit_score: 169
  • Evalue 2.50e-39
Bradyrhizobium elkanii strain UASWS1015 Contig135, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53718.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 204.0
  • Bit_score: 230
  • Evalue 1.70e-57
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 198.0
  • Bit_score: 169
  • Evalue 7.00e-40

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Taxonomy

Bradyrhizobium elkanii → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGCGGCGGACCAAGGAGCAGGCGGCGGAGACGAGACGGGCCATCCAGCAGGCGGCGGAGGCGCTGTTCCTGCAGGAGGGATACGAGGCGGTCTCGCTGGACGAGATCGCCGCGACGGCGGGCGTGACCCGGGGCGCCGTGCATTTCCATTTCGGCAACAAGCTCGGTCTGCTGTCCGCCATCCGCGACCGGATCGGGATGCCGATGCGGGACCTGTCCGAGCGCCTGGCCGCCGGCACGACGTCCTCCCCCCTCGATGCGCTGGGCGACGCGATCGAGGCGACGCTCGCCAATCTCCAGAGCGATCCGCGGCACCGCAGGCTCCTCGGGATCTTCATGGCCGTCGAGACCGTGACGGAGGAAGAGGCCGACGAGATGCGCCGCTTCCGCGGACGGGTGCGCGGGCTGGTGGCGGAGATCTACGCGGTCGCCGAGGCGCGCGGCGCCCTGGCCGAGCCGTGGACGGCCCGCGCCGCGGCGCGCGCCTTCGACGCCATGGTCGACGGCTTCATCCACGAGTGGGTCCGGGGCGAGACGGACTTCGAGCTGGTCCCCGATGCGGTCGCCATCATCCGGACCTTGCTGGCGACCTGGGCAACGGGAGAACGGCCATGA
PROTEIN sequence
Length: 205
MRRTKEQAAETRRAIQQAAEALFLQEGYEAVSLDEIAATAGVTRGAVHFHFGNKLGLLSAIRDRIGMPMRDLSERLAAGTTSSPLDALGDAIEATLANLQSDPRHRRLLGIFMAVETVTEEEADEMRRFRGRVRGLVAEIYAVAEARGALAEPWTARAAARAFDAMVDGFIHEWVRGETDFELVPDAVAIIRTLLATWATGERP*