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berkeley_reactor_200306_biofilm_scaffold_12255_146

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 151845..153512

Top 3 Functional Annotations

Value Algorithm Source
Oligopeptide ABC transporter n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JL54_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 552.0
  • Bit_score: 738
  • Evalue 2.80e-210
oligopeptide ABC transporter similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 552.0
  • Bit_score: 738
  • Evalue 7.80e-211
Oligopeptide ABC transporter {ECO:0000313|EMBL:ACM30646.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 552.0
  • Bit_score: 738
  • Evalue 3.90e-210

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1668
ATGCCTGAGACAGATGGGAACACCACGATCATGCTGACCCGTCGCCACGCCCTGCGCCTGATGGGAGCAGGCGGCGCTGCGACGTTGATCCTGCCCGGCGCGCTCGGTGCGGGAGAAGCCCTGGCGGCAAACGCTTCGCCCACCGGCCAGCTCACCATCGGCTTCAACCAGGAGCCGACGGTGTTCAATCCGCACAAGCTGCATATCGAGGTGGACGAAGGCGTCCAGTTCGCGCTGTTCGACACGCTGTTCTTCGCCGACGGCCAGGGCCTGTTCCAGCCGTCGCTCGTCTCGGAAGTGCCGACGGTGGCCAACGGCGGCATCTCGGCGGACGGCCTCGCCTGGCGCATCAAGCTGCGCGACGACGTCAAGTGGCACGACGGCAAGCCATTCACCGCCGAGGACGTGAAGTTCACCATCGAGCTTCTCGTCAACCCGAAGTTCAACAGCTGGCGGCGCACCGGCCACGAGCTGGTTCGCGACCTCGAGGTGGTATCGCCGACGGAATTGACCTGGCGGATGGAGAAGCCCTTCGCCGCCTATCCCTCGATCCTTGCCGCAACCTTCATCGTCGCCGCGCATAGTTTCGACGGCGTGTCCGACCTGAACAACGCCCCCATCGACAGCAAGCCCGTCGGGACCGGACCTTTCAAGTTCATCAGCCGGACCTCCGGCGACAATATCGTGCTCGAGGCGAACACCGGCTATTTCGCCGAGGGGCCGCACATCCAGCGCCTGGTCTTCAAGTACATCCCCGACGCGACCGTGATGTACGCGCAATTCAAGGCCGGCGACATCGATCTGCACAGCCTCAACTACATCTCACCTGAGAACTATGAGGAGGCCAAGGGCCTGGCCGGCAAGACCGCGGCGATCTATCCGTCCTCGACCATCGAATGCATCGCCTTCAACACGGCCGTTCCGCCGCTGGACGAGCTGGCCGTGCGTCAGGCGATCTACTATTCCTACGACAAGACTTCGATCATCCAGTCTCTCTACTACGGTGTTCCGACCGCGACCGACAGCTACATGCCGCAGCAGTCGTTCTACTACAATCCGGACCTGCCCAAGCACGAGTTCAGCCCGGACAAGGCCAAGCAGGTCATGGAGGAGGCGGGTTGGAAGGTCGGCTCCGACGGCATCCGCGTCAAGGACGGCAAGCGGCTCTCCTTCACCAACTCGACCACGTCGGGCAACCACGTGCGCGAGCAGATGCAGCAGTTCTTCCAGCAGACGCTCGCCGAAGTCGGCATCGAGATGAAGATCGAGAACATGCCGGCTGCGGTCCTGTTCGCCGATTTCTGGATGAAGTCGCAGTTCCACAGCGTGCTGCACGGGCAGGACTACCTGACCGGATCCGACCCGGACACGTCGGACTTCTTCCTCTCCAGCAACAGTGCGGCGAAGGGCGGCGGCGGCCTCAACTTCTGGCAATATGCCAACCCGGACGTGGACAAGCTCCTGGCCAAGGGCAATGCCCTCTTCGTGCCGGACGAGCGCAAGCCGATCTACTTCAAGATCCAGGAGATCGTGCGCCACGACCTGCCGTTCATGCCCCTGTTCCAGCGCGCCCGCATCGTCGGATACAAGACCGGCCTGACCGGCTACAAGGACAATGTGAACAACCGCATCGATACCTGGAACATCAACACCTGGACCTTCAGGTAG
PROTEIN sequence
Length: 556
MPETDGNTTIMLTRRHALRLMGAGGAATLILPGALGAGEALAANASPTGQLTIGFNQEPTVFNPHKLHIEVDEGVQFALFDTLFFADGQGLFQPSLVSEVPTVANGGISADGLAWRIKLRDDVKWHDGKPFTAEDVKFTIELLVNPKFNSWRRTGHELVRDLEVVSPTELTWRMEKPFAAYPSILAATFIVAAHSFDGVSDLNNAPIDSKPVGTGPFKFISRTSGDNIVLEANTGYFAEGPHIQRLVFKYIPDATVMYAQFKAGDIDLHSLNYISPENYEEAKGLAGKTAAIYPSSTIECIAFNTAVPPLDELAVRQAIYYSYDKTSIIQSLYYGVPTATDSYMPQQSFYYNPDLPKHEFSPDKAKQVMEEAGWKVGSDGIRVKDGKRLSFTNSTTSGNHVREQMQQFFQQTLAEVGIEMKIENMPAAVLFADFWMKSQFHSVLHGQDYLTGSDPDTSDFFLSSNSAAKGGGGLNFWQYANPDVDKLLAKGNALFVPDERKPIYFKIQEIVRHDLPFMPLFQRARIVGYKTGLTGYKDNVNNRIDTWNINTWTFR*