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berkeley_reactor_200306_biofilm_scaffold_12255_155

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(162074..162397)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QWW9_METTR similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 107.0
  • Bit_score: 195
  • Evalue 1.70e-47
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 107.0
  • Bit_score: 195
  • Evalue 6.20e-48
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACB95130.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 107.0
  • Bit_score: 195
  • Evalue 3.10e-47

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Taxonomy

Beijerinckia indica → Beijerinckia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGGCAACGAAAAGTAGGTTCAAAGGCGATGTGTCTGAGGCGATCCATTCGTCTGCGGCCATGCTTCACAAGGTCGGTGCGTTCGACAAGGCAACTATGCGCGATTTCGATGCGCGCCACCTGGTCGTCCCGACAGAGATCGAGCCTGCGCAGATCAAGCAGCTCCGCGAAGCCAACAATGTCAGTCAGCCCGTATTCGCCCGTTATCTCAACACCAGCGAAAGTACGGTCGAGAAGTGGGAAACCGGCGCCAAAAGGCCGAGTGGCATGGCGCTCAAGCTTCTAACTGTGGTTCAAAAGCATGGGCTTAAAGTCCTCGCGTAG
PROTEIN sequence
Length: 108
MATKSRFKGDVSEAIHSSAAMLHKVGAFDKATMRDFDARHLVVPTEIEPAQIKQLREANNVSQPVFARYLNTSESTVEKWETGAKRPSGMALKLLTVVQKHGLKVLA*