ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_18395_5

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 6512..7522

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated helicase Cas3 n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISQ3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 309.0
  • Bit_score: 260
  • Evalue 1.30e-66
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ46193.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 348.0
  • Bit_score: 273
  • Evalue 2.80e-70
CRISPR-associated helicase Cas3 similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 309.0
  • Bit_score: 260
  • Evalue 3.80e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylobacterium aquaticum → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGTTCGCTCACTCCCTGCCGTCAAGGCCGCTCTCGGAATGGGAGCCGCTGCATGACCACTTGCTCGCTGTGGCCAATAGAGCCGCGGAATTTGCCGAGGTCTTCGGCTGGGCAGAACTCGGCCGGGCTGGCGGCTGGCTGCACGATATCGGCAAATGCTCGACCGAGTTTCAATCCCACATCTCTGTGAGCGCGGGCGATCACGGTGGACGGGGACCTGACCATTCATCCGCCGGCGCGCGCGAAGCGTTGCGACTGTTCGGCAAAGGCTTCGGCACTCTTCTCGCCTTCGTCATCGCCGGCCACCACGCCGGTCTGGCCGACGGCGATGCGCTCGAGGCGAGGCTCTCCAAGGAACCGCCCGCCTATGACGGATGGGAGGCTCACGCCGGCGCGCTGCCCGCGGCCGGTGCGCTGGCGCCAACGCGAAGGCCACTCCCGGGCAGCGAACGCGGCTTCGGCCTCGCCTTCCTCGCGCGCATGGTCTTTTCCTGTCTCGTCGACGCGGACAGGCTGGAGACGGCGGCGTTCTACGAGCGGGCGGAGGGACGAACGGTCGAGCGTGGCGGCGGCACGCCCCTGTCCGCGTTGCGCGATCGGTTGCGTGCCCACATGGCCGTCAAGCGGGAGGAGGCGCGTGCCCGGGCGTCGTCGGAAACGGAGCGGAGACTGAATGCCCTTCGCGCCGACATCCTCGACCACGCGCTGGCGCTCGCGCCTGCGGCGCCCGGCCTGTTCACGATGACGGTGCCGACCGGCGGCGGCAAGACCCTGGCATCCCTGTCGTTCGCGCTCGATCACGCCGTGCGTCATCGCCTGCGCCGGGTGGTGTATGTCATCCCGTTCGCGGGAGCGCGGATCGAAACCGGAATATGGCACGGCGCTGGACACGGCGGCAGAGCCGATCGCCGTCGCTCCCTCGCGGGAGCGCGGATCGAAACATGGGACCAAGCATGCTCTGGCCAATTTCCCTGGTCGCTCCCTCGCGGGAGCGCGGATCGAAACCAATGA
PROTEIN sequence
Length: 337
MFAHSLPSRPLSEWEPLHDHLLAVANRAAEFAEVFGWAELGRAGGWLHDIGKCSTEFQSHISVSAGDHGGRGPDHSSAGAREALRLFGKGFGTLLAFVIAGHHAGLADGDALEARLSKEPPAYDGWEAHAGALPAAGALAPTRRPLPGSERGFGLAFLARMVFSCLVDADRLETAAFYERAEGRTVERGGGTPLSALRDRLRAHMAVKREEARARASSETERRLNALRADILDHALALAPAAPGLFTMTVPTGGGKTLASLSFALDHAVRHRLRRVVYVIPFAGARIETGIWHGAGHGGRADRRRSLAGARIETWDQACSGQFPWSLPRGSADRNQ*