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berkeley_reactor_200306_biofilm_scaffold_24940_2

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 1720..3336

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTP7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 554.0
  • Bit_score: 366
  • Evalue 3.60e-98
Uncharacterized protein {ECO:0000313|EMBL:EIM27339.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.2
  • Coverage: 554.0
  • Bit_score: 366
  • Evalue 5.10e-98
protein of unassigned function similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 521.0
  • Bit_score: 346
  • Evalue 1.10e-92

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1617
GTGCCGAGCCCCCTCTACCCCCTTTCGCGAAGCGGCGTGCGCAAAGCGCTTCGCATCGCCTTCACCCTGGCGGCGTCCATTCTGACGCTGGGCGTGCTCGTCCGCCCGACCGAAGATGCCGTGGCCAACGGCGACACCCGCTCGATCAGCCTGGTGCACATGCACACGGGCGAGACCCTCGACGTCGTCTACAAGCGCAACGGCGTCTATGACGCCGACGCGCTGAAGAAGCTCAACTGGTTCCTGCGCGACTGGCGCCGCGAGGAGCCGACCCGCATGGATCCGCGCCTGTTCGACATCGTCTGGATGTCCTACCGCGCCGTCGGCGCCACCCAGCCGATCCATGTCGTCTGCGGCTACCGCGCCCCCGAGACCAACGCCATGCTGCGCCGGCGCTCGCGCGGCGTCGCCAAGTTCAGCCAGCACACGCTCGGCAAGGCGATGGACTTCTACATTCCCGGCGTGCGCCTGTCGGACCTGCGCGCCGCCGGCCTCAAGCTGCAGCGCGGCGGCGTCGGCTTCTATCCGACCTCCGGCTCGCCCTTCATCCACATGGACGCCGGCAGCGTGCGCATGTGGCCGAAGATGACCCGCGCCCAGCTCGCCAGCATCTTCCCCGACGGCAAGACCGTCCATATTCCTGCCGACGGCCGGCCCATGCCGGGCTACCAGGCGGCCTATGCCGAACTGCAGCGCAACGGCGGCTCGGTGGGCGGCTTCGTCGGCGGCGACGAGGACGATGGCGGCGGGCCCTCCTTCTTCGCCCGCCTGTTCGGCGGCGGCGGTTCGACGGAAACCGCCGCGCGCGACACGCAGCGCCCGCAGGCGGTGGTCATGGCCGGCAAGACCGGCACGGTCATCGCACCGGCGCCGATGCCGGCCGCAACCCGCGTCCCAGCGCCCGCGCCGACACCCGCTGCGCCCGAGCCCGCGCCGGTGGTGGTGGCGAAGCTCGAGCGCACCGTGCCGATTCCGTTGCCCGAGCCCCGTCCGGCCGAGCTCGCCGGGCCGCAGCTCGCCTGGCAGGCGGGTCCGGACGGCCAGCCGGCGACCGCCGTGGTCGCGGCCGCCAGCATCCCGCTGCCGCCCGCCCGGCCGGGTCTCGACCGGGCCGCGGACGCGCCGCCGGTGCAGCTCGCCGCTCTCGATCAGACGCAGGACGCTTCGCCGGAGCTGCGCCCCGGCGCGCCGGTCATGGCCGACGCCTCGCGCAGCATCGACCTCCTCCTGCGCCGCGACACGCCGCTGCCGCCGAGCCGCGCCCTCGGCTTCGCCGATGCCGGCGCCGGGCTGATCGCCAAGCCGCGCAGCGAACGGCCGCCGCTGATCGCCACCCGCTTCGAGAAGCTCAACTTCGTCTCCGTCACCGCGCCCGTCGCGACAGCCCGCAACAAGGCGCAGGCCGGGCTGGTGCGTCCGGACCTCAAGAGCGTCGGCTCGCTCATCCCGGCGCCGTCCAAGGTGGTGGTGATGCGCTTCGGCGTCGCCGCCTACCAGGACCTGCGGGCGGAGAAGTTCACCGGCACCGCGATCAAGCCGCTGCGCACCGCCAGCTTCGCCCTGGCGCCCGACATCATCACCGGCAGCGTCGCCAAGCCCGACCCCGGCCTGAACTGA
PROTEIN sequence
Length: 539
VPSPLYPLSRSGVRKALRIAFTLAASILTLGVLVRPTEDAVANGDTRSISLVHMHTGETLDVVYKRNGVYDADALKKLNWFLRDWRREEPTRMDPRLFDIVWMSYRAVGATQPIHVVCGYRAPETNAMLRRRSRGVAKFSQHTLGKAMDFYIPGVRLSDLRAAGLKLQRGGVGFYPTSGSPFIHMDAGSVRMWPKMTRAQLASIFPDGKTVHIPADGRPMPGYQAAYAELQRNGGSVGGFVGGDEDDGGGPSFFARLFGGGGSTETAARDTQRPQAVVMAGKTGTVIAPAPMPAATRVPAPAPTPAAPEPAPVVVAKLERTVPIPLPEPRPAELAGPQLAWQAGPDGQPATAVVAAASIPLPPARPGLDRAADAPPVQLAALDQTQDASPELRPGAPVMADASRSIDLLLRRDTPLPPSRALGFADAGAGLIAKPRSERPPLIATRFEKLNFVSVTAPVATARNKAQAGLVRPDLKSVGSLIPAPSKVVVMRFGVAAYQDLRAEKFTGTAIKPLRTASFALAPDIITGSVAKPDPGLN*