ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_24940_17

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(17220..18152)

Top 3 Functional Annotations

Value Algorithm Source
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.9
  • Coverage: 310.0
  • Bit_score: 461
  • Evalue 8.70e-127
Methionyl-tRNA formyltransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUP4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 310.0
  • Bit_score: 446
  • Evalue 1.20e-122
fmt; methionyl-tRNA formyltransferase similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 299.0
  • Bit_score: 426
  • Evalue 6.30e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

bacterium YEK0313 → Bacteria

Sequences

DNA sequence
Length: 933
ATGGCGCTGCGCGTCGTCTTCCTCGGCACGCCGGACTTCGCCCGGCCGGTGCTGGCCGAGATCCTGGGCCAGGGCCACGAGGTCGCGGCGGTCTATACCCGGCCGCCGGCGCCGGCCGGCCGCGGCATGGAGCTTTCGCCCTCGCCGGTGCACCGGCTCGCCGACGGCTTCGGCATTCCGGTGTTCACGCCCAGGAGCTTTCGCGATGCCGAGGTCGCCGACACCTTCGCCTCGCTCGAAGCCGACGTCGCCGTGGTCGTCGCCTATGGCCTGATCCTGCCGAAGGTGGCGCTGGAGGCGCCGCGCGAGGGCTGCCTCAACCTGCATGCCTCGCTGCTGCCGCGCTGGCGCGGCGCGGCGCCGATCCAGCGCGCCGTCATGGCCGGCGACGCGGAGACCGGCGTCATGGTGATGCGCATGGAGGAGGGGCTCGACACCGGCCCGGTCGCCATGGCCGAGCGGCTGGCGATCGGACCCGACATGACGGCGGGCGAAGTTCACGACCGGCTGTCGGTGCTGGGCGCCGACCTGATGGCGCGGGCGCTCGCGGCGCTGTCGCGCGGGTCGCTGTCCTTCGTGCCGCAGGCGGAGGCGGGCGTCACCTATGCTCGCAAGATCGACAAGGCCGAGGCGCGCATCGACTGGTCGCAGCCGGCGGCGGCGGTGCACAACCAGATCCGCGGCCTGTCGCCCTTTCCCGGCGCCTGGTTCGAGGCGGACTGGGGCCAGGGCCCGCAGCGGGTCAAGGCGCTGCGCTCGACGCTTGCCGAGGGCGCCGGCGCGCCCGGCACGGTGCTCGACGAGGCGCTCGCCGTCGCCTGCGGCGAGGGCGCGGTGCGCCTGATCGAGGTGCAGCGGGCCGGCAAGGCACCGATGAAGGTGCCGGAATTCCTGAAGGGGGCCGGTCTCGGCAGGGGCGCGACGCTGTCCTGA
PROTEIN sequence
Length: 311
MALRVVFLGTPDFARPVLAEILGQGHEVAAVYTRPPAPAGRGMELSPSPVHRLADGFGIPVFTPRSFRDAEVADTFASLEADVAVVVAYGLILPKVALEAPREGCLNLHASLLPRWRGAAPIQRAVMAGDAETGVMVMRMEEGLDTGPVAMAERLAIGPDMTAGEVHDRLSVLGADLMARALAALSRGSLSFVPQAEAGVTYARKIDKAEARIDWSQPAAAVHNQIRGLSPFPGAWFEADWGQGPQRVKALRSTLAEGAGAPGTVLDEALAVACGEGAVRLIEVQRAGKAPMKVPEFLKGAGLGRGATLS*