ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_24940_37

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(36371..37246)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, permease protein YurM n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U915_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 295.0
  • Bit_score: 434
  • Evalue 7.70e-119
putative amino acid ABC transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 290.0
  • Bit_score: 434
  • Evalue 2.20e-119
ABC transporter, permease protein YurM {ECO:0000313|EMBL:ENN86733.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 295.0
  • Bit_score: 434
  • Evalue 1.10e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGACGGCGCTGGCCGATCGCGCCGCGCGGGCCTTCGAGGCCGAGCAGCCCCGCCGCGACTGGGTGCTGGTCGGCCTGTGGATCGCTCTGGTCGTGGTGGCCGTGGTCTGGCTCGCGCCCTTCGTCTTCATCGTCTTCACCTCGCTGAAGTCGACCGCCGAGGTCATGGGATCGAGCGCCTTCGCGCCGCCCAGGGATCCGCAATACGCCAACTATGCCGCCGCCTGGGGCCGGGGGCGCTTCGGCACCACGGTCTTCAACAGCGCCGTCATCACCATCGTCAAGGTGCCGCTCGGCCTGATGATCTCGGCCATGGCCGCCTATGCGCTCGCCTGCATGCGCATTCCCGGCGGCAAGCTCATCCTGATCGGCGTGCTGTTCGGCACGATGATCCCGTTCCAGGTGATGCTGGCCCCGCTGTTCACCCTGGTGAACGGCCTGCACTTGATCGACACCTATCCCGGCGTGATCCTGCCCTATATCGCCTTCGGCATCCCCTACCAGGTCTTCATCCTGCACGGCTTCTTCCGCGGCATTCCGGTGGAGCTCAACGAGGCGGCCCGCATCGACGGCGCCTCGCACGCCACCATCTTCCTCAAGATCTTCCTGCCGCTGTCGCTGCCCGTGCTGGCGGCGCTGCTGATCCTCGACTTCGTCGCCACCTGGAACGAATTCGCGATGGCCCTGGTGCTGCTGCAGGACCGCGACATGTGGACCCTGCCGCTCGGCCTCTCCGCCTTCCAGGGCCAGTTCTCCCGCGACTACGGCCAGCTCAACGCGGCGATCGTGATGACGGTGCTGCCGGCGACGATCGTTTACCTCATCTTCCAGCGCTATTTCGTGTCCGGCCTCACCTCCGGCGCGGTCAAGGGCTGA
PROTEIN sequence
Length: 292
MTALADRAARAFEAEQPRRDWVLVGLWIALVVVAVVWLAPFVFIVFTSLKSTAEVMGSSAFAPPRDPQYANYAAAWGRGRFGTTVFNSAVITIVKVPLGLMISAMAAYALACMRIPGGKLILIGVLFGTMIPFQVMLAPLFTLVNGLHLIDTYPGVILPYIAFGIPYQVFILHGFFRGIPVELNEAARIDGASHATIFLKIFLPLSLPVLAALLILDFVATWNEFAMALVLLQDRDMWTLPLGLSAFQGQFSRDYGQLNAAIVMTVLPATIVYLIFQRYFVSGLTSGAVKG*