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berkeley_reactor_200306_biofilm_scaffold_45995_6

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 4601..5488

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z0T9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 292.0
  • Bit_score: 374
  • Evalue 9.50e-101
LysR family transcriptional regulator {ECO:0000313|EMBL:KIZ39391.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 292.0
  • Bit_score: 407
  • Evalue 1.10e-110
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 66.8
  • Coverage: 292.0
  • Bit_score: 374
  • Evalue 2.70e-101

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGACGCTGGAACAGCTGCGGATCTTCGTTGCGGTCGCCGAGCAGGAGCATGTCACCCGGGGCGCGCGCGACCTCAACCTGACCCAGTCGGCGACGAGCGCGGCCATCGCCGCGCTCGAAGCACGTTATGCCACGAGGCTGTTCGACCGGGTGGGACGGCGCATCGTGCTGACCGAGGCCGGGCGCCTGTTCCTGGTCGAGGCCCGCGCCGTCCTGGCCAGGGCAGGCGCGGCGGAGACGGTGCTGGCCGACCTCGCCGGTCTCAGGCGCGGCTCGCTGGCTCTCGCCGCCAGCCAGACCGTCGGCAATTACTGGCTGCCGCGCCTGATCCACCGCTATCGCATCCGTCATCCCGGCATCGCCGTGACGTTGTCGATCGGCAACACCACCACGGTGGCGGCCATGGTACGCGAGGGCGAGGCGCATGTCGGCATCGTCGAGGGCGAGGTCGACGATGCCGCGCTCGCCGTCGATGCCGTGGCCGAGGACCGCCTCGTCCTGGTGGTGGCGCCCGACCATCCCTGGGCGGCGCGGGCGCCCGAGCCGCCGGACGCCTTCGCCACGGCGCGCTGGGTGCTGCGCGAGCGCGGCTCGGGCACCCGCGCCGTGCTCGAGGCGGTGCTGCGGGCCCTCGCCGTCAGGCCCGACACGCTCGACATCGCCCTGGAGCTGCCCTCGAACGAGGCCGTGCGGGCTGCCGTGGAGGCGGGCGCCGGGGCGACGGTGATCTCGGAGCTGGTGGTTGCCTCTTCGCTGAAGGCCGGCACGCTGGCCGCCGTCGACATCGCGCTGCCGCAGCGCCGCTTCTTCGCCCTGCGCCACAAGGAGCGCTATCGCACCCAGGCCGAGCGCGAGCTCTACCGTCTCCTCGGCGAGCCGACGGGTTGA
PROTEIN sequence
Length: 296
MTLEQLRIFVAVAEQEHVTRGARDLNLTQSATSAAIAALEARYATRLFDRVGRRIVLTEAGRLFLVEARAVLARAGAAETVLADLAGLRRGSLALAASQTVGNYWLPRLIHRYRIRHPGIAVTLSIGNTTTVAAMVREGEAHVGIVEGEVDDAALAVDAVAEDRLVLVVAPDHPWAARAPEPPDAFATARWVLRERGSGTRAVLEAVLRALAVRPDTLDIALELPSNEAVRAAVEAGAGATVISELVVASSLKAGTLAAVDIALPQRRFFALRHKERYRTQAERELYRLLGEPTG*