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berkeley_reactor_200306_biofilm_scaffold_45995_17

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 14260..15375

Top 3 Functional Annotations

Value Algorithm Source
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 371.0
  • Bit_score: 624
  • Evalue 7.10e-176
chorismate synthase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031C2045 similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 369.0
  • Bit_score: 632
  • Evalue 2.40e-178
5-enolpyruvylshikimate-3-phosphate phospholyase similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 362.0
  • Bit_score: 602
  • Evalue 5.90e-170

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Taxonomy

Microvirga aerilata → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1116
ATGTCGTTCAACAGTTTCGGCCATCTCTTCCGTGTCACCACCTGGGGCGAAAGCCACGGACCTGCTCTCGGCTGCGTTATCGACGGATGTCCGCCACGCCTGCCGGTCAGCGAGGCGCTGATCCAGTCCTTCCTCGACCGCCGCAAGCCCGGCCAGAGCCGCTTCACCACGCAGCGACGCGAGCCGGACCAGGTCAGGATCCTCTCCGGGGTGATGACGGACGAGGCCACGGGAACGCTGGTGACCACCGGCACGCCGATCAGCCTCATGATCGAGAACGTCGACCAGCGCTCCAAGGATTACGGCGAGATCAAGGACAGGTATCGTCCGGGCCACGCCGACTATGCCTACGACATCAAATACGGCATCCGGGACTATCGCGGCGGCGGGCGTTCCTCGGCCCGCGAGACGGCGGCGCGGGTGGCCGCCGGCGCCATCGCCCGGCAGGTCGTGCCCGGCCTCGTCGTGCGCGGCGCCCTGGTGCAGATGGGCCCGCACCGTATCGACCGCGGCAATTGGGACTGGGACGAGGTCGCCAACAACCCATTCTTCTGCCCGGACGCCAAGGCGGCGGCCGTCTTCGAGACCTATCTCGACGGCGTGCGCAAGGCGGGCTCGTCCATCGGCGCGGTGATCGAGGTGGTGGCCGAGGGCGTGCCGCCCGGGCTCGGCGCACCCGTCTACGGCAAGCTCGACGCTGATCTTGCGGCCGCCATGATGAGCATCAACGCGGTCAAGGGCGTCGAGATCGGCGATGGCTTCGCGGCAGCCGAGCTCTCCGGCGAGAGCAATGCCGACGAGATGCGCATGGGCAATGACGGCCGGCTGCTGTTCCTGTCCAACCACGCCGGCGGCATCCTCGGCGGCATCTCCACCGGGCAGCCGGTGGTCTGCCGCTTCGCGGTCAAGCCGACATCGTCGATCCTGCAGCCGCGACGCACCGTCGATCGCCACGGCCACGACACCGAGATCGTCACCAAGGGGCGCCACGACCCCTGCGTCGGCATCCGGGCCGTGCCGGTGGGAGAGGCGATGATGGCCTGCGTCATCGCCGACCATTTCCTGCGGCACCGTGGCCAGACAGGCGCGCCGCTGGCCTGGCCGTTCCAGGCTTGA
PROTEIN sequence
Length: 372
MSFNSFGHLFRVTTWGESHGPALGCVIDGCPPRLPVSEALIQSFLDRRKPGQSRFTTQRREPDQVRILSGVMTDEATGTLVTTGTPISLMIENVDQRSKDYGEIKDRYRPGHADYAYDIKYGIRDYRGGGRSSARETAARVAAGAIARQVVPGLVVRGALVQMGPHRIDRGNWDWDEVANNPFFCPDAKAAAVFETYLDGVRKAGSSIGAVIEVVAEGVPPGLGAPVYGKLDADLAAAMMSINAVKGVEIGDGFAAAELSGESNADEMRMGNDGRLLFLSNHAGGILGGISTGQPVVCRFAVKPTSSILQPRRTVDRHGHDTEIVTKGRHDPCVGIRAVPVGEAMMACVIADHFLRHRGQTGAPLAWPFQA*