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berkeley_reactor_200306_biofilm_scaffold_44015_12

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 5121..5369

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S17 n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FABD36 similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 81.0
  • Bit_score: 134
  • Evalue 2.70e-29
rpsQ; 30S ribosomal protein S17 similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 77.0
  • Bit_score: 133
  • Evalue 1.70e-29
30S ribosomal protein S17 {ECO:0000255|HAMAP-Rule:MF_01345}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 77.0
  • Bit_score: 133
  • Evalue 8.50e-29

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Taxonomy

Xanthobacter autotrophicus → Xanthobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 249
ATGCCAAAACGCGTCCTGCAAGGCGTCGTCGTTTCCGACAAGAACGACAAGACGATCGTGGTCAAGGTGGAGCGCCGCTTCACCCATCCGCTCTTGAAGAAGACGGTGCGCCGCACCAAGAACTACCATGCGCATGACGAGGCGAACGGCGCCAAGGTCGGCGACATCGTGTGGATCGAGGAAGGCCGTCCCCAGTCCAAGCTCAAGCGCTGGGTGCTGGTGGAAGGCGAGGCGGCGAAGTCCGAGTAG
PROTEIN sequence
Length: 83
MPKRVLQGVVVSDKNDKTIVVKVERRFTHPLLKKTVRRTKNYHAHDEANGAKVGDIVWIEEGRPQSKLKRWVLVEGEAAKSE*