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berkeley_reactor_200306_biofilm_scaffold_44015_25

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 12172..12540

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=RS13_METPB similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 122.0
  • Bit_score: 216
  • Evalue 1.10e-53
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 122.0
  • Bit_score: 221
  • Evalue 6.00e-55
rpsM; 30S ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 122.0
  • Bit_score: 216
  • Evalue 3.00e-54

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
GTGGCCCGCATCGCAGGCGTCAACATTCCCACGGCGAAGCGCGTCGAGATCGCGCTGCAGTATATCCATGGCATCGGCGCGGCCAAGGCCAAGGAGATCGTGGCCAAGGTCGGCATCGCGCCGGAGCGGCGCGTGCACCAGCTCACGGACCAGGAAGTGCTGCAGATCCGCGAGACCATCGACCGCGACTACATGGTCGAGGGCGACCTGCGTCGCGAGGTCTCGATGAACATCAAGCGCCTGATGGACCTCGGCTGCTATCGCGGCCTGCGCCATCGCCGCAGCCTGCCGGTCCGCGGCCAGCGCACGCACACCAATGCCCGCACCCGCAAGGGCAAGGCCAAGCCGATCGCCGGCAAGAAGAAGTAA
PROTEIN sequence
Length: 123
VARIAGVNIPTAKRVEIALQYIHGIGAAKAKEIVAKVGIAPERRVHQLTDQEVLQIRETIDRDYMVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGKAKPIAGKKK*