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berkeley_reactor_200306_biofilm_scaffold_42397_33

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 28956..29564

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Rhizobium gallicum RepID=UPI00036478CE similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 196.0
  • Bit_score: 280
  • Evalue 9.80e-73
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 66.8
  • Coverage: 196.0
  • Bit_score: 271
  • Evalue 9.90e-71
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACS56683.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 196.0
  • Bit_score: 271
  • Evalue 8.40e-70

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGCCGATCGCCCTCCGACCGCGGACCAAGCCCCCGGCCGAGCGCCGCGACGAGCTGATGAACGCGGCCGAACGGCTGTTCCTGGCCCGGGGCTTCGAGGGGACCACGGTCGAGGAGATCACCACCGGCGCCGAGGTCGCCAAGGGGACCTTCTATCTCCACTTCGCCACCAAGGGCGACGTCCTCGAAGCCCTGCGCGAGCGCTTCGTGCAGGGCCTGCTCGACGCCGTGACCGCAGCGGTCGCCGGACAGCCGCGGGACGACTGGCGCGGCAGGCTCGCGGCCTGGGCGCGGGCCTGCGCCATCGGCTATCTCGACGCGGCGAGCCTGCATCACCTCGTCTTCGTCGCCGTGCCCCCGCCGAGCCGGGAGGGCATGGCGCGCAACGTCCTGGTCGACCATCTCGACGACCTCATCGCCGCCGGGGCCCATGGCGGGGCCTGGACGATCGAGGAGTCCGGCTTCACGGCGGTGTTCCTGTTCAACGCCCTGCACGGCGTGGTCAACCAGGCCGCCGCCGGGGAGCCCACAGGGGATCGCGGCAGCCTGTTGCGGGCGCTCGAGGCGCATGTCTTCCGTGCAGTCGGATTGCGTCCCGAGGCCGGGTGA
PROTEIN sequence
Length: 203
MPIALRPRTKPPAERRDELMNAAERLFLARGFEGTTVEEITTGAEVAKGTFYLHFATKGDVLEALRERFVQGLLDAVTAAVAGQPRDDWRGRLAAWARACAIGYLDAASLHHLVFVAVPPPSREGMARNVLVDHLDDLIAAGAHGGAWTIEESGFTAVFLFNALHGVVNQAAAGEPTGDRGSLLRALEAHVFRAVGLRPEAG*