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berkeley_reactor_200306_biofilm_scaffold_42397_35

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(30572..31141)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UZ67_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 189.0
  • Bit_score: 244
  • Evalue 7.30e-62
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ENN84117.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 189.0
  • Bit_score: 244
  • Evalue 1.00e-61
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 189.0
  • Bit_score: 229
  • Evalue 4.00e-58

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGGCCCGCCCCCTCAGCGAAGAAAAGCGTGATGCGATCCTGACGGCCGCCGCCGATTTGGTGGCGACGCTCGGCATCGGCGCGTCCACGGCGAAGATCGCCAAGGCAGCCGGCGTCGCTGAAGGGACGCTCTTCACCTATTTCCCGACCAAGGACGATCTCTTGAACCAGCTCTTCCTCGAAATCGAGAGCGGTCTCGCCGAGGTCATGACCGCCTCGCATCCCACGACGAGCGACCCGCGTGAATGTGTCCGGCACATCTGGGAGCGGTTGATCGACTGGGGCGTGGCGAACCCGACATGGCGCAAGACGCTGCGCCAGCTCAAGGTCTCGGGGCGCATCAGGCCCGACAGCCTGCGGCGCTTCGACATCCAGTTTCGCGAGACTCGCGCAAGGGTCGAGCGCAGCCTCGCCGGGCGCAGCGACCCGGCGCGCATGCCGTTCTACATCGACACGATGCTGCTCGGATTGGCGGAGATCGCCATGGACGCCATCGCGGTGAATCCCGGGGAGCGGGAGCGCATCACGCAGGCCGGCTTCGACCTGTTCTGGAAGGGCACCGCAGCCTGA
PROTEIN sequence
Length: 190
MARPLSEEKRDAILTAAADLVATLGIGASTAKIAKAAGVAEGTLFTYFPTKDDLLNQLFLEIESGLAEVMTASHPTTSDPRECVRHIWERLIDWGVANPTWRKTLRQLKVSGRIRPDSLRRFDIQFRETRARVERSLAGRSDPARMPFYIDTMLLGLAEIAMDAIAVNPGERERITQAGFDLFWKGTAA*