ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_42397_38

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(32678..33631)

Top 3 Functional Annotations

Value Algorithm Source
L-carnitine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02129}; Short=CDH {ECO:0000256|HAMAP-Rule:MF_02129};; Short=L-CDH {ECO:0000256|HAMAP-Rule:MF_02129};; EC=1.1.1.108 {ECO:0000256|HAMAP-Rule:MF_02129};; TaxID=1397528 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. PBN3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 318.0
  • Bit_score: 443
  • Evalue 1.50e-121
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157) similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 318.0
  • Bit_score: 436
  • Evalue 4.80e-120
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Halomonas jeotgali RepID=UPI000348F2BC similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 318.0
  • Bit_score: 449
  • Evalue 1.90e-123

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halomonas sp. PBN3 → Halomonas → Oceanospirillales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGGCCAAGACCATCGCGATCATCGGAACCGGCGTGATCGGCGCCGGCTGGGCGGCCCGGGGCCTCGCCCATGGCCATGACGTCGTCGCCTGGGATCCGGCGCCCGGCGCCGAGGACAGGCTGCGCGCGGCGATCGACAATGCCTGGGGCGCGCTGGAGCGCCAGGGCCTCGCCGAGGGCGCCCGCCGCGACCGGCTGGTGATGCTGGGCTCGGTCGAGGCGGCGGTGGCCGCCGCCGACTTCATCCAGGAGAATGCGCCCGAGCGCGAGGAGCTGAAGCAGGATCTCCTCGCCCGCATCGACGCCGCGGCCAAGCCCGAGGCCCTGATCGCCTCCTCCACCTCCGGCCTGCTGCCGAGCCGCCTGCAGGCGCGGATGCAGCGGCCCGAGCGCTTCGTCGTCGGCCACCCCTTCAACCCGGTCTATCTCCTGCCGCTGGTCGAGGTGCTGGGCGGCGAGAAGACGGCTGCGGCCAGCGTCGCCGCGGCGATGGACTTCTACCGCTCGATCGGCATGCGCCCGCTGCATGTGCGCACCGAGATCGAAGGCTTCGTCGCCGACCGCCTGATGGAGGCGCTCTGGCGCGAGGCGCTGTGGCTGGTCAACGACGGCGTCGCCACCACCGAGGAGATCGACGCGGCCGTGGTCTATGGCTGCGGGCTGCGCTGGTCGCTGATGGGCACCTTCCTCACCTTCCACCTCGCCGGCGGCGAGGGCGGCATGCGCCACATGCTGCACCAGTTCGGGCCAGCCCTGAAGCTGCCCTGGACCAAGCTCACGGCGCCGGAGCTGACCGAGGACCTGATCGGCCGGGTCGCCGACGGCTGCGAGCACCAGGCCGCCGGGCGCTCGATCAAGGCGCTGGAGCGCCGCCGCGACGATTTCCTGATCGAGCTGCTCGCCCTGGTGCAGAAGTACTGGCCCGAGGCCGAGGGCCTGCAGGGGCGGATCTGA
PROTEIN sequence
Length: 318
MAKTIAIIGTGVIGAGWAARGLAHGHDVVAWDPAPGAEDRLRAAIDNAWGALERQGLAEGARRDRLVMLGSVEAAVAAADFIQENAPEREELKQDLLARIDAAAKPEALIASSTSGLLPSRLQARMQRPERFVVGHPFNPVYLLPLVEVLGGEKTAAASVAAAMDFYRSIGMRPLHVRTEIEGFVADRLMEALWREALWLVNDGVATTEEIDAAVVYGCGLRWSLMGTFLTFHLAGGEGGMRHMLHQFGPALKLPWTKLTAPELTEDLIGRVADGCEHQAAGRSIKALERRRDDFLIELLALVQKYWPEAEGLQGRI*