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berkeley_reactor_200306_biofilm_scaffold_42397_44

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(38475..38864)

Top 3 Functional Annotations

Value Algorithm Source
Putative cobalamin biosynthesis CobE protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ARL2_AZOBR similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 129.0
  • Bit_score: 110
  • Evalue 8.60e-22
putative cobalamin biosynthesis CobE protein similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 129.0
  • Bit_score: 110
  • Evalue 2.40e-22
Putative cobalamin biosynthesis CobE protein {ECO:0000313|EMBL:CCD00073.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.6
  • Coverage: 129.0
  • Bit_score: 110
  • Evalue 1.20e-21

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Taxonomy

Azospirillum brasilense → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGAACATCGTCGCCGCCGGCTTCGGCTGCCGCAAGGGCTGCGAGGCGCAGGAGATCATCGAGCTCGCCGAGCTGGCCATGGCCAGGGCCGAGCTGCCGATGCGCCATCTCTCCGGCCTGTTCGCCCCCGCCTTCAAGCACGGCGAGACCGGGCTCGCCGAGGCGGCGCGGCGTCTCGGCCTGCCGCTGGTGCTGATTCCCGAACCGATGATGAAGGCGGCCGAGCCGCGCGCGATCACCGTCTCGGAGCGGGTTGTGGCCCTCACGGGCCTCGCCAGCGTCGCCGAGACCGCCGCCCTCGCCGGCGCCGGCCCGACCTCGCGCCTGGTGCAGCCGCGCACCGCCAGCCGCAGCGCCACCTGCGCCATCGCGGTGTCGGGGCAGGGGTGA
PROTEIN sequence
Length: 130
MNIVAAGFGCRKGCEAQEIIELAELAMARAELPMRHLSGLFAPAFKHGETGLAEAARRLGLPLVLIPEPMMKAAEPRAITVSERVVALTGLASVAETAALAGAGPTSRLVQPRTASRSATCAIAVSGQG*