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berkeley_reactor_200306_biofilm_scaffold_106759_8

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 5167..6564

Top 3 Functional Annotations

Value Algorithm Source
Serine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000255|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00176}; Short=SerRS {ECO:0000255|HAMAP-Rule:MF_00176};; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000255|HAMAP-Rule:MF_00176}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 471.0
  • Bit_score: 602
  • Evalue 4.80e-169
Serine--tRNA ligase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=SYS_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 471.0
  • Bit_score: 602
  • Evalue 3.40e-169
seryl-tRNA synthetase similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 471.0
  • Bit_score: 602
  • Evalue 9.60e-170

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Taxonomy

Xanthobacter autotrophicus → Xanthobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1398
ATGTATGACGTGAAGTGGATCCGCGACAATCCGGGTCTCTTCGACGAGGGCCTGGCCCGGCGCGGCGCAGTGCCGCCGGCATGGCGCTCCGAGCATATCCTGGCGCTCGAGGCCGAGCGCCGCGCCATCGTCACGCGCCTGCAGGCCTCCCAGGAACGCCGCAACGCCGCCTCCAAGGAGATCGGCCAGGCCAAGGCGCGCAAGGACGAGGCCGCGGCTCAGGCGCTGATGGCGGAGGTCGCGGCGCTGAAGCAGTCCATGCCGGCGGACGAGGCCGTCTTGCGGACGGCCGACGCCGCGCTCAACCGGCTGCTCTCGGAGATTCCAAACCTGCCGGCGGACGACGTGCCGCTCGGCGCCGACGAGCACGGCAATGTCGAGCGGCAGACCCGTTACGGCATGCCGCGCGCCTACACGTTTGCGCCGCGCGAGCATTTCGAGATCGGCGAAGGGCTCGGCCTGATGGATTTCGAGACGGCGGCCAAGCTGTCGGGCGCCCGTTTCGTGGTGCTGAAGCGCGGGCTGGCCCGACTCGAGCGCGCCATCGGCCAGTACATGCTCGACACGCATGTCGGCGAGCACGGCTATATCGAGGTCAACCCGCCACTGCTCGTGCGCAGCGAGACGATGTTCGGCACGGCGCAGCTGCCGAAGTTCCGCGACGATCAGTTCTTCGCCGGCACCCATGACGGCGTCGACGGGCAGTACGAGACCGCCATCGACAGGATCGCCGCGGGCGCTGCGGCGTCCGAGGCCCTGCAGGCGGCGCGCGAGGAGGCGAACCAGCGGCGGCTGTGGCTGATTCCCACCGCCGAGGTCCCGCTCACCAACCTGGTGCGCGAGGCCATCACGCCCGAGGAGGAGCTGCCGCTGCGCCTCACTGCGCTGAGCCATTGCTTCCGGGCCGAAGCCGGCGCTGCCGGGCGCGACACCCGCGGCATGATCCGCCAGCACCAGTTCCAGAAGGTGGAGCTCGTCTCGATCACCACGCCGGAGGAGAGCCGGGCCGAGCACGAGCGCATGCTGGCCTGCGCCGAGGCGGTGCTGAAGGGGCTCGACCTGCATTACCGCGTGATGACGCTGTGCACCGGCGACATGGGCTTTGCCAGCCAGAAGACCTATGACATCGAGGTCTGGCTGCCGGGGCAGGGCGCCTTCCGCGAGATCTCGTCCTGCTCGGTCTGCGGCGATTTCCAGGCCCGGCGCATGAATGCGCGCTACCGCCCGCGCGGCGGCGGCCAGCCCCGCTACGTCCACAGCCTCAACGGGTCCGGCGTCGCCGTCGGGCGGGCGCTGGTGGCGGTGCTGGAGACCTACCAGAACGCCGACGGCTCGGTCACGGTGCCCGAGGTGCTGCTCCCCTACATGGGCGGCATCCGGCGCCTCGAGACGGCCTGA
PROTEIN sequence
Length: 466
MYDVKWIRDNPGLFDEGLARRGAVPPAWRSEHILALEAERRAIVTRLQASQERRNAASKEIGQAKARKDEAAAQALMAEVAALKQSMPADEAVLRTADAALNRLLSEIPNLPADDVPLGADEHGNVERQTRYGMPRAYTFAPREHFEIGEGLGLMDFETAAKLSGARFVVLKRGLARLERAIGQYMLDTHVGEHGYIEVNPPLLVRSETMFGTAQLPKFRDDQFFAGTHDGVDGQYETAIDRIAAGAAASEALQAAREEANQRRLWLIPTAEVPLTNLVREAITPEEELPLRLTALSHCFRAEAGAAGRDTRGMIRQHQFQKVELVSITTPEESRAEHERMLACAEAVLKGLDLHYRVMTLCTGDMGFASQKTYDIEVWLPGQGAFREISSCSVCGDFQARRMNARYRPRGGGQPRYVHSLNGSGVAVGRALVAVLETYQNADGSVTVPEVLLPYMGGIRRLETA*