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berkeley_reactor_200306_biofilm_scaffold_106759_14

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 11512..13113

Top 3 Functional Annotations

Value Algorithm Source
preprotein translocase subunit SecD n=1 Tax=Afipia birgiae RepID=UPI0002F16BCE similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 534.0
  • Bit_score: 661
  • Evalue 4.10e-187
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 534.0
  • Bit_score: 658
  • Evalue 4.90e-186
protein-export membrane protein SecD similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 534.0
  • Bit_score: 650
  • Evalue 2.70e-184

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Taxonomy

Bradyrhizobiaceae bacterium SG-6C → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1602
ATGAACTATACACGCTGGAAAACGGCGGCCATCCTCGGCACGATCCTGATCGGACTGTGGCTCGCCCTGCCCAACCTCTATCCGGAGTCCTGGCGTTCGGCCATGCCGCGCTGGCTGCCGCACCAGCCGGTGACGCTCGGCCTCGACCTGCAGGGCGGCTCCCAGCTCCTTCTCGAGGTCGACCAGGCAGCGGTGCTGAAGGACCAGGTGGAAGCCCTGCGCGAGGACGCCCGGCGCACGCTGCGCGATGCCAAGATCGGCTTCACCAATCTCGGCGTGCAAGGCCGCTCGGTGCAGCTCACCCTGCGCGACCCCAACGACCAGACGCGGGCGCTCGACGTCCTCAGGCCGCTCGGCGCTCCGGCCAACGCCGCCCTGTTCACCGGCGGCGACCAGCGCTCGGCCGACGTCAGCTCCGGCGACAATGGCCAGATCAAGCTGACGGTGACGGATTTCGGGCTGAACGACCGCATGTCGCGGGTGCTGTCGCGGTCGATGGAGATCATCGGCATCCGCGTCAACCAGCTCGGCACCACCGAGCCCTCGATCCAGCGCCAGGGCGCCGACCGCATCCTGGTGCAGCTGCCGGGCCTGCAGGACCCCTCGCACTTCAAGGACATCCTCGGGCAGACGGCCAAGCTCGAGTTCCGGCTCGTCGATCCGAACGTCTCGCCGGAGCAGGCGCTGCAGACCCGGCCGCCGGCCGATTCGGAGATCCTGATGTCGGAGGACGGCAAGGTCCCCTATGTCGTGGAGAAGCGCGTCATGGTGGCGGGCGAGGATCTCACCGACGCCCAGGCGAGCTTCGACCAGCAGAACCGCGAGCCGGTGGTCAGCTTCCGCTTCAACACCCGCGGCGCCCAGCAGTTCGGCCGGGTGACGCAGGAGAATGTCGGCCGGCCCTTCGCCATCGTCCTCGACAACAAGGTGATCTCGGCCCCGAACATCCGCGAGCCGATCCTCGGCGGCTCGGGCCAGATCTCCGGCAACTTCACCACGCAGAGCGCCAACGACCTCGCCCTGCTGCTGCGCTCGGGCGCGCTGCCCGCGCCGATGACCGTGGTCGAGGAGCGCACTGTCGGCCCCGGCCTCGGCGCCGACTCGATCCGGGCCGGCGAGCTGGCGGCCGTGACCGGATCGGGCCTGGTGGTCCTGTTCATGATCCTGACCTACGGCCTGTTCGGCATCATCGCCTCCGTCGCCGTCGCCATCAATGTCGGCCTGATCTTCGGTATCCTGTCGCTGCTCGGCGCCACGCTGACGCTGCCGGGCATTGCCGGCGTGGTGCTGACGGTGGGCATCGCGGTCGACAGCAACGTACTGATCTACGAGCGCATCCGCGAGGAGGTGAGGGCGGGGCGCTCGGTGCTGATGGCGCTCGATGCCGGCTTCTCCCGCGCGCTGGCGACCATCCTCGATTCCAACATCACCACCTTCATCGCCGCGGCGGCGCTGTTCATGGTCGGCACCGGCGCGGTGAAGGGCTTTGCCGTCACCCTCGGCGTCGGCATCATCACCACGGTGTTCACCGCCTTCACGGTGACGCGCCTGCTGGTCTCCTGGTGGTATCGCGGGTTCAAACCCCGCACGATCCCGATCTGA
PROTEIN sequence
Length: 534
MNYTRWKTAAILGTILIGLWLALPNLYPESWRSAMPRWLPHQPVTLGLDLQGGSQLLLEVDQAAVLKDQVEALREDARRTLRDAKIGFTNLGVQGRSVQLTLRDPNDQTRALDVLRPLGAPANAALFTGGDQRSADVSSGDNGQIKLTVTDFGLNDRMSRVLSRSMEIIGIRVNQLGTTEPSIQRQGADRILVQLPGLQDPSHFKDILGQTAKLEFRLVDPNVSPEQALQTRPPADSEILMSEDGKVPYVVEKRVMVAGEDLTDAQASFDQQNREPVVSFRFNTRGAQQFGRVTQENVGRPFAIVLDNKVISAPNIREPILGGSGQISGNFTTQSANDLALLLRSGALPAPMTVVEERTVGPGLGADSIRAGELAAVTGSGLVVLFMILTYGLFGIIASVAVAINVGLIFGILSLLGATLTLPGIAGVVLTVGIAVDSNVLIYERIREEVRAGRSVLMALDAGFSRALATILDSNITTFIAAAALFMVGTGAVKGFAVTLGVGIITTVFTAFTVTRLLVSWWYRGFKPRTIPI*