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berkeley_reactor_200306_biofilm_scaffold_106759_26

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(24543..25889)

Top 3 Functional Annotations

Value Algorithm Source
SsrA-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IJB8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 423.0
  • Bit_score: 417
  • Evalue 8.70e-114
SsrA-binding protein {ECO:0000313|EMBL:ERF83865.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 423.0
  • Bit_score: 417
  • Evalue 1.20e-113
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 438.0
  • Bit_score: 414
  • Evalue 3.60e-113

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Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1347
ATGGGCGATGGCCGCGCCCTGCCCCGGCGCGGCGCCACGGGAACAGTCATGGACGGCACCCAAGAAGCCCCGACGGTCGCGACGCTGCGTGCCCACGAGCACCGGGGCACGGTGCTGGAGGAAGTGCACGCCCGCCCGTTCCGGCCGCTGGGGACGCCGCGGCGGCTCCTGCACTTCGCCTTCCTGACCGACGCGGCGGAGGCCGAGGCCGACCGGGCGGCGCTGGTGCGCTTCTGCGCCGAGCGCGGCGTGGAGCAGCCACGCGACGGCGTCAGGCAGTTTCGCACCGTCTTCGGCGACAAGGCGCTGCGCTGGGAGCAGCACGGCGAGTTCACCACCTATTGCTGGCAGCTCGCCGACGGCGACGGGTCGCTGTTCATCCGGCAGGCCGGGGAGCTCGCCTGGCCGATGGGGCTGATCGAGCAGCCCGGCCGGCATCTGGTCTCGGTCGACCTCCAGCTCGTCCGGCCCGAGGCCACGCCGGACCTCGCCGCCATATTCGACGCCGCCTCGCTCTGCTCGGTGACGGTCGAGGACGGCGCCGCCCGGGTCTCCACCGATTTCAAGGCCGGCGCCGACGGCTTCGTGCGCATCCTGGTCGTCAACCAGGGGCTCGACCCGACGCGCACCGGCGCGCTGGCCCAGCGCCTGCTGGAGCTCGAGACCTACCGCCTGCTGGCGCTGCTCGGGCTGCCGGAGGCTCAGCGACTGAGCGAGCCGATCGCCCGGATCGAACGCAGCCTGGTCGAGATCACCCGGGAGATGACCCGGGTCGACGGCCTGGACGCCAACCAGAGGCTGCTCGACCGCATTGCAGCCCTGGCGGCGGAGCTGGAGGCCGGCGTCGCCGAATCCCTGTTCCGATTCGGCGCGACCCGCGCCTATCACGGCATCGTCCAGGGGCGCCTGGCGGCGATCCACGGCGAAGCAGCGGCCGGCGGCGAGACCTTCGACAGCTTCCTCAGCCGCCGGATGACGCCGGCCTTGCGCACCTGCGCCGCGATCGAGGCGCGGCAGGCCAGCCTGTCGAGCCGGCTGGCGCGGGCGGCGCAGCTCCTGCGCACCAAGGTCGACATCGAGCTGGAGCGCCAGAACCGCGACATCCTGTCGACGCTGAGCGAGCGCACGCGCCTGCAGCTCAGGCTGCAGCACACGGTCGAAGGCCTGTCGATCGCGGCGGTGAGCTACTATGTGGTCGGGCTGATCGGCCATCTCGCCGGGCTGCTGCCGGCCCTGGGCCTCACGATCGACAAGGAGGTCGTGACCGCCGCGGCGATCCCGGTCGTGGTGGCGGCGGTCGCCTGGTTCATCCTGATGCGCGTCCGGCGACACAAAAACATTCCATAA
PROTEIN sequence
Length: 449
MGDGRALPRRGATGTVMDGTQEAPTVATLRAHEHRGTVLEEVHARPFRPLGTPRRLLHFAFLTDAAEAEADRAALVRFCAERGVEQPRDGVRQFRTVFGDKALRWEQHGEFTTYCWQLADGDGSLFIRQAGELAWPMGLIEQPGRHLVSVDLQLVRPEATPDLAAIFDAASLCSVTVEDGAARVSTDFKAGADGFVRILVVNQGLDPTRTGALAQRLLELETYRLLALLGLPEAQRLSEPIARIERSLVEITREMTRVDGLDANQRLLDRIAALAAELEAGVAESLFRFGATRAYHGIVQGRLAAIHGEAAAGGETFDSFLSRRMTPALRTCAAIEARQASLSSRLARAAQLLRTKVDIELERQNRDILSTLSERTRLQLRLQHTVEGLSIAAVSYYVVGLIGHLAGLLPALGLTIDKEVVTAAAIPVVVAAVAWFILMRVRRHKNIP*