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berkeley_reactor_200306_biofilm_scaffold_111575_7

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(5612..6958)

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z085_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 45.8
  • Coverage: 448.0
  • Bit_score: 364
  • Evalue 1.10e-97
Branched-chain amino acid ABC-type transport system permease component {ECO:0000313|EMBL:KFC65220.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 447.0
  • Bit_score: 376
  • Evalue 4.10e-101
inner-membrane translocator similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 446.0
  • Bit_score: 279
  • Evalue 1.40e-72

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1347
ATGCCGCGCCCCCTGCTCCTCCTCGCCGCCCTGATCCTCGCCCTTGCCCTCACGGCCTGCGGCATGGTGCTCGACGGCGACCAGGTCAGGGTCTGCCGGCAGACGCTGCCGGCGGTCAACCCGGACGCCACGGCGATCACGGTGCTGCGCGTCGACCCTGCCCCGGCGCCCTATGCGGTGCGCCTCGCCTATCGCGTCGAGCAGGGCGGCATCGAGCAGGACCGCTTCGTGCTCTGCGGCTTCGCCGCCGAGGGCATCGACCTCGACCGCAATGTCCTTGCCCGCTTCGCCACCGAGGAGGGGCCCTATTCGCCGATCAAGCTGCACATCCTCAACCGCTACTGGCTGGAGAAGACGGCGCTCGCCACCGCGGCCGATCCCGGGCCGGGGCTCGCCGCGCCGCCGCTGATCGTGGCGTCGACCGGCATCGCCTATCTCGTCCAGGCGCTCGCCAACGCCCTGCCCTCCACCGCGATGATGATGCTGATCGCCGTCGCCTATGCCCTGATCTACGGCCTCGTCGGGCGCATCAACCTCGCCTTCGGCGAATTGGCGGCGCTCGGCGCCTACGGCGCGGTCATCGGCGCGGTGCTCGCCACCCAGGCCGGCTTCACCTCGGTGATATCAGGCCTCTTCGCCGCCGCCGCCCTGGGCATCGGCATGTCCGTCCTGCACGGCCTCGCCATCGAGCGGCTGGTCTTCACCCCGCTCGCCTTCGGCCGCGGCCAGAGCATCCTGGTGGCGACGCTGGCGCTCGCCATCGTGCTGCAGGACTACATGCGGCTCACCCAGGGGGCCGAGAACCGCTGGATCCCGCCGCTGCTCACCGCCGCCCTCCCGCTCGCCGGCTCGCCGGACTTCACCGCCACGGTGACGCCGATGCAGCTGATCGTCGCCGGCTTCACCACGGTCCTGGCGCTCGCCCTCGTCCTCCTCATGCGCCTCAGCGGCTTCGGCCGGCGCTGGCGCGCCACCGCGGACGATGCCGGCATGGCCGGCCTGATGGGCATCTCGCCCAAGGCCATGCTCGGCCAGACCTTCATGCTGGCCACGGGCCTGGCCGGGGCGGCCGGCTTCATCATGACCGTCTATTACGGCGGCGCCGGCTTTGCCGCCGGCACGATGATCGGCCTCAAGGCGCTGGTCGCCGCCGTGGTCGGCGGCATCGGCTCGATCGGCGGGGCGCTGCTCGGAGGCCTCGCCATCGGCCTGTTCGAAGCCTTCTGGTCCGCCTATCTGCCGATCGAGCACCGCGACCTGGCGGTGCTGTCGCTGCTCTCCATCGTCCTCACCCTGCGGCCCGGCGGCATCTTCGGCCTCGGCGACGATCGGCCGCGGCAGGTCTAG
PROTEIN sequence
Length: 449
MPRPLLLLAALILALALTACGMVLDGDQVRVCRQTLPAVNPDATAITVLRVDPAPAPYAVRLAYRVEQGGIEQDRFVLCGFAAEGIDLDRNVLARFATEEGPYSPIKLHILNRYWLEKTALATAADPGPGLAAPPLIVASTGIAYLVQALANALPSTAMMMLIAVAYALIYGLVGRINLAFGELAALGAYGAVIGAVLATQAGFTSVISGLFAAAALGIGMSVLHGLAIERLVFTPLAFGRGQSILVATLALAIVLQDYMRLTQGAENRWIPPLLTAALPLAGSPDFTATVTPMQLIVAGFTTVLALALVLLMRLSGFGRRWRATADDAGMAGLMGISPKAMLGQTFMLATGLAGAAGFIMTVYYGGAGFAAGTMIGLKALVAAVVGGIGSIGGALLGGLAIGLFEAFWSAYLPIEHRDLAVLSLLSIVLTLRPGGIFGLGDDRPRQV*