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berkeley_reactor_200306_biofilm_scaffold_111575_14

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 11793..12305

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000367B3CD similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 159.0
  • Bit_score: 234
  • Evalue 5.20e-59
DoxX family protein {ECO:0000313|EMBL:CCM79101.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.1
  • Coverage: 162.0
  • Bit_score: 231
  • Evalue 6.20e-58
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 151.0
  • Bit_score: 227
  • Evalue 1.80e-57

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Taxonomy

Rhizobium mesoamericanum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGATGATGATGACCGCGAACGGGGGAACCGTCGCCGGGCGGACCGCCGAAGTCCTGGAACGGGCGATCGGGATCATCCGCGGGATCGCCCAGCCATCCCTCGTGCAGCTCGTCCTGCGCGTCGCGCTGGCCGTTCCGTTCTGGAAATCGGGAACCCTCAAATGGGCCGGCTTCCTGCAGCTGAACGATACGGCGATCTATCTCTTCAGCGACGAGTTCCAGCTGCACCTGCCCGGCGGGCCCTATCCGTTCCCGGCGCCGGCCGTCATGGCCTTCCTGTCGGGGTCGGCGGAGATCGTCTTTCCCGTGCTGCTGGTCCTCGGCCTCGCCACCCGCTTCGCCGCCCTCGGGCTGCTGGTCATGACCGCCATCGTCGAGCTGACCGTGCCGGAGGGCTGGCCGATCCATCTCACCTGGGCCGCGATGGCGCTCGGCATCATGGCCTGGGGGCCGGGGCGCGTGTCCCTCGATGCCGCGATCGCCAGGATCGGACGCGCTCTCGCCGGACGCTGA
PROTEIN sequence
Length: 171
MMMMTANGGTVAGRTAEVLERAIGIIRGIAQPSLVQLVLRVALAVPFWKSGTLKWAGFLQLNDTAIYLFSDEFQLHLPGGPYPFPAPAVMAFLSGSAEIVFPVLLVLGLATRFAALGLLVMTAIVELTVPEGWPIHLTWAAMALGIMAWGPGRVSLDAAIARIGRALAGR*