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berkeley_reactor_200306_biofilm_scaffold_111575_26

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 22789..23250

Top 3 Functional Annotations

Value Algorithm Source
N utilization substance protein B homolog n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9W8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 152.0
  • Bit_score: 225
  • Evalue 2.80e-56
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 153.0
  • Bit_score: 225
  • Evalue 3.10e-56
nusB; transcription antitermination protein NusB similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 149.0
  • Bit_score: 222
  • Evalue 5.20e-56

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGAGCCGCGCGGAGAAGCGGGCGGCGGCGCGGCTGGCCGCGGTCCAGGCGCTCTACCAGATGGAGATCGCCGGCGCCGGCGTCGCCGACGTGCTGGCCGAGTTCGAGGCGCATTGGATCGGCCAGGAGGTCGAGGGCGACGAGTACAAGCCGGCGGAAGCCGCCTTCTTCCGCGACATCGTCGGCGGCGTGGTGCGCGAGCAGCGCAGCATCGATCCCAAGATCGACCAGGCGCTGGCCGAGGGCTGGCCGCTGAAGCGGGTCGACGCCATCCTGCGCGCCATCCTGCGCGCCGGCGCCTACGAGCTCGGCGAGCGCCACGACATCCCGCCGCGCGTCTCCATCACCGAATATGTCGACGTGGCGCACGCCTTCCTCGACCGCGAGGAGGCCGGCATGGTCAACGCCGTGCTCGACCGGATCGCGCGTATCGACCGGGCCGAGGATTTCGCCAAGGCGTGA
PROTEIN sequence
Length: 154
MSRAEKRAAARLAAVQALYQMEIAGAGVADVLAEFEAHWIGQEVEGDEYKPAEAAFFRDIVGGVVREQRSIDPKIDQALAEGWPLKRVDAILRAILRAGAYELGERHDIPPRVSITEYVDVAHAFLDREEAGMVNAVLDRIARIDRAEDFAKA*