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berkeley_reactor_200306_biofilm_scaffold_111575_121

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(126913..128250)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Streptomyces rapamycinicus RepID=UPI000382F8B8 similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 415.0
  • Bit_score: 497
  • Evalue 1.10e-137
Integral membrane transport protein similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 411.0
  • Bit_score: 568
  • Evalue 1.10e-159
Integral membrane transport protein {ECO:0000313|EMBL:AHF77410.1}; TaxID=1239307 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Sodalis.;" source="Sodalis praecaptivus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 411.0
  • Bit_score: 568
  • Evalue 5.60e-159

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Taxonomy

Sodalis praecaptivus → Sodalis → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1338
ATGAGTGCAGATATCGGAGCGGCTCCGGTTGCGAGGGCGCCCGGCCGCGAGCCGGCGGCCCGGGCCCATCCGGAAGGCCAGACGATCGCGAAGGTCGCCCTGGCCAGCGCGATCGGCAACACGATCGAATATTACGACTTCACGCTCTACGCGACCGCAACCGCTCTGGTGTTCAACAAGATCTTCTTCCCGAGCCTGGATCCGCTGGTCGGCTCGCTGGCGGCTTTTGCGACGTTCTTCGTCGGCTACTGCGCCCGCCCGCTGGGTGGCATCCTCTTCGGACATTTCGGCGATCGCGTCGGCCGGAAGACGGCATTGCTGGTCACCATCCTGATCATGGGCATCGGCACGGTCCTGATCGGCCTGATGCCGTCATACGATCAGATCGGCATCCTGGCCCCGATCGGCCTCGTCCTGCTCAGAACGCTCCAGGGTATCGGCATCGGGGGCGAGTATGCCGGCGGCATGGCGATGACGGTCGAGCACGCACCTGCCGAAAGGCGCGGGTTCTACAGCTCGCTCGTCCATGTCGGCGTTCCCGCGGGCTTTCTCATCCCGATCGCCTTGCTGGGCTTTCTCTCGACCAGCATGGACGAAGCGCAATTCCTGAGCTGGGGCTGGCGCCTGCCGTTCCTCTTCAGCATCGTGCTGGTCGGCATCGGCCTCTTCATCCGGTTCCAGATTGCCGAGACACCGGCCTTCCAACGGGTCCTGGCCGAAGAGGTGCCTGCGAGCATTCCGGTGGTCGAGGCCGTGCGCGATCACCGCTCCAATCTCTTCTTCGGCATCGGTGCCAAGATTGCCGAAAGCGGATTGTTCAACATCTACGCGGTGTTCGTGATCACCTATTGCGTGACGCAGCTGGGTCTTCCCAAGCAGACCATCCTGAACGGCGTTCTCGTCGGCTGCGCCCTGGAATGCCTCACGCTTCCCCTGTTCGGCGCCCTGTCCGATCGGGTCGGCCGAAAGGCCGTCTACATCGGCGGCATGATCTTCCAGGCGCTGCTGGCGATCGTGTTCTTCGCGATGGTCGACACCGGCGACACCGGCATGATCTGGCTCGCGATCGCGCTGGGCCTCGCCATCGGCCATGGGTCGGTCTACGGCGCGCAGGGCGCCTATTTCTCGGAGCTGTTCCCGGCGCGGGTTCGCTACAGCGGCCTCTCGCTGGTCCAGCAGATCGGCCCCATCCTGGGTGGCGGCCTGTCTCCGCTGATCGCGACGCTCCTGCTCGCCGAGTACGGCGGCTCGGCCATGGTCGCGGTCTACATGGCGGCGATGGCCATCCTGTCCGCTGTCTGCACACTCGGCCTCAAGCCTCTGAGAGGCGATCTGTAG
PROTEIN sequence
Length: 446
MSADIGAAPVARAPGREPAARAHPEGQTIAKVALASAIGNTIEYYDFTLYATATALVFNKIFFPSLDPLVGSLAAFATFFVGYCARPLGGILFGHFGDRVGRKTALLVTILIMGIGTVLIGLMPSYDQIGILAPIGLVLLRTLQGIGIGGEYAGGMAMTVEHAPAERRGFYSSLVHVGVPAGFLIPIALLGFLSTSMDEAQFLSWGWRLPFLFSIVLVGIGLFIRFQIAETPAFQRVLAEEVPASIPVVEAVRDHRSNLFFGIGAKIAESGLFNIYAVFVITYCVTQLGLPKQTILNGVLVGCALECLTLPLFGALSDRVGRKAVYIGGMIFQALLAIVFFAMVDTGDTGMIWLAIALGLAIGHGSVYGAQGAYFSELFPARVRYSGLSLVQQIGPILGGGLSPLIATLLLAEYGGSAMVAVYMAAMAILSAVCTLGLKPLRGDL*