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berkeley_reactor_200306_biofilm_scaffold_115287_10

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(7643..8893)

Top 3 Functional Annotations

Value Algorithm Source
D-amino-acid dehydrogenase (EC:1.4.99.1) similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 409.0
  • Bit_score: 570
  • Evalue 2.10e-160
D-amino-acid dehydrogenase {ECO:0000313|EMBL:ADH88965.1}; EC=1.4.99.1 {ECO:0000313|EMBL:ADH88965.1};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.7
  • Coverage: 409.0
  • Bit_score: 570
  • Evalue 1.10e-159
D-amino acid dehydrogenase n=1 Tax=Xanthobacteraceae RepID=UPI00037B9F54 similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 409.0
  • Bit_score: 585
  • Evalue 2.90e-164

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Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1251
ATGAGCGACACCACGACCTTCGACACCATCGTCCTCGGCGGCGGCATGGTCGGCACCTCGGCGGCGCTGCATCTCGCCCTGCGCGGGCGCTCCGTCGCCCTGGTCGACCGCCGCGCGCCGGGCGAGGAGACCTCCCACGGCAATGCCGGCCTGGTCGAGCGCTCCTCGCTCTACCCCGTCGCCTTTCCGCGCAGCCTGCCGGCCCTCGCCCGGGTGGTGCTCGGCCGCAACCCGGCGGCGCATTTCCACTGGCGCGCGCTGCCGGCCCTGGCGCCCTGGCTGCTCGCCTATTGGCGCGCCTCCGCGCCCGAGCGGCTGGAGGAGACGGCCAGGATCATGCACCCGCTGCTGGCCAGCACGGTCGAGGAGCATTACGCCCTCGCCCGCCGCGCCGGCGCCGAGCATTTCTTCCGCGACAACGGCTGGCTCAAGGTCTACCGCAGCGAGGCGAGCCTGGCGGGCGAACGCCGCGAATTCCCGCTGGCGCAAGGCTTCGGCATCGACGTCCGCGAGCTCTCCGTGGCCGAGGCCCTGGCGCTGGAGCCCAATCTCGCCCCGGTCTTCCGCGGCGCCGTGCTCTGGTCCGACCCGCATTCGGTGTCCGACCCCGGCGGCGTCACCAAGGCCTACGCCGCCCATCTCGAGGCAATCGGCGGCAAGGTGCTCGTCGGCGACGCCCGCACCCTCGCGCAGGGCGCCGAAGGCTGGTCGGTCGCGGGCGAGGCCGGTCCGATCCGCGGCCGCAGCGCCGTGGTGGCGCTCGGGCCCTGGTCGATGGACCTGCTGCGCCTGCTCGGCTACCGCATGCCGCTGGCCGTCAAGCGCGGCTACCACATGCATTACCGGCCGGAGGGCAATGCCGGGCTGACGCGGCCGGTGCTGGACGAGGACGGCGGCTATGTCATCACGCCGATGCGCCGCGGCATCCGCCTGACCACCGGGGTCGAGTTCGCCGGCCGCGATGTGCCGAAGACGCCGGTCCAGCTCGCCCGGACCGAGGTGCTGGCCCGCGGTCTGTTCCCGCTGGGGGCGCGGGTCGATCCGGAGCCGTGGATGGGCGCGCGCCCGGTCTTCCCGGATTCGCGCCCGGTGATCGGCCCGGCGCCGCGCCACGCCAACCTGTGGTTCGCCTTCGGCCACCAGCATCTGGGCTTCACGCTCGGCCCGGCGTCGGGCCGGCTGCTGGCGGAGATGATGAGCGGGGAGGCGCCCTTCGTCGATGCCGCGCCGTTCTCGCCGGCGCGGTTCTGA
PROTEIN sequence
Length: 417
MSDTTTFDTIVLGGGMVGTSAALHLALRGRSVALVDRRAPGEETSHGNAGLVERSSLYPVAFPRSLPALARVVLGRNPAAHFHWRALPALAPWLLAYWRASAPERLEETARIMHPLLASTVEEHYALARRAGAEHFFRDNGWLKVYRSEASLAGERREFPLAQGFGIDVRELSVAEALALEPNLAPVFRGAVLWSDPHSVSDPGGVTKAYAAHLEAIGGKVLVGDARTLAQGAEGWSVAGEAGPIRGRSAVVALGPWSMDLLRLLGYRMPLAVKRGYHMHYRPEGNAGLTRPVLDEDGGYVITPMRRGIRLTTGVEFAGRDVPKTPVQLARTEVLARGLFPLGARVDPEPWMGARPVFPDSRPVIGPAPRHANLWFAFGHQHLGFTLGPASGRLLAEMMSGEAPFVDAAPFSPARF*