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berkeley_reactor_200306_biofilm_scaffold_106013_8

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 4507..7077

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E4FEE7 similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 844.0
  • Bit_score: 988
  • Evalue 4.00e-285
PAS domain S-box {ECO:0000313|EMBL:EIM30601.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 857.0
  • Bit_score: 964
  • Evalue 6.70e-278
PAS/PAC sensor hybrid histidine kinase similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 876.0
  • Bit_score: 959
  • Evalue 4.40e-277

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2571
ATGGCGAACGGCGAGGGCGGTGGCGGCCAAGGCTTCGCCATCGACCGCAGCGAGCGGGCGAGCAGGATCAAGCCTGTGCTCGTCGTTGTCCTTGCCGCGGCGCTGCTGGCGGCGCTGGCCGCCTCGACCTTCCTGGCCAAGGAGCAGGCGGAATCGCTGGTGCTCGGGCTCCTGGCGATCCTGGCGGCGGTCGGCGTGGTGTCGCTGTGCATGCACGCCTTCGGCTTCATGCATTTCGGCCAGGACGGCCAGGTGCGCAACGACCTGACCAAGGCCATCGCCGACGGCTCGCCCGAGGGGCTGGTCGTCACCGACAAGGACGGCCGGGTGGTCTACGCCAACGCGGCCTATCTCGCCATGACCGGCGCCACCGGCGAGCAGGACGTGCGCCCGGTCGAGCGCGCCTTCACCGGCGACCCCGACGTGTCGGAGCCGGTCTACCGCCTGGCGCAGGCGGCGCGCGGCGGCCAGACGCTGACCGAGGAGTTCCGCATCGCCGCCACGCCGCCGGCCGGCGGCGCCTCGTGGTACCGGGTGCGGGTGCGCCCGATGCTCCGCGCCTCCGGGGCCCGCGACGTGGTGTGGACCGTCGCCGACATCACCCGCGAGCGCGAGCGCCAGGAGAACGCCTTCCTGGAGCTGCAGCACGCCATCGACTATCTCGACCATGCGCCGGCCGGCTTCTTCTCGGCCGACCCCTCCGGCGAGATCGCCTACATGAACGCCACGCTCGCCGGCTGGCTCGACTTCGACCTCGCCCAGTTCGGCAATGGCGGGCTGAAGCTCACCGACATCCTGCCGGGCAATACCGGCGCGCTGATCGCTGCCGCCCCGGGCGAGCCGGGCAGCGTCAAGACCGAGATCATCGACGTCGACCTGCGCCGGCGCAACGGCACGATCCTGCCGGTGCGGCTGTTCCACAAGGTGGCCTTCTCCGCCGACGGCCATCCCGGCGCTTCGCGCACGCTGGTGATCTATCGCGGGCCGGGCGGCGACGTGTCGGAGGGGCTGCGCGCCGCCGAGGTGCGCTTCGCCCGTTTCTTCAACAACAGCCCGCTCGCCATCGCCACCGTCGACAAGGACGGCCGCGTCATCCGCACCAACGCGGCCTTCATGCGGCTCTTCCGCGGCGCCTTCCGGGGCGAGGCCCAGGGCAGCCCCCTGGTCGAGGGCGTGGCCGAGCGCGAGCGCGAAGGGCTCGGCGGCCTGCTCAAGCAGGCGACGGCCGGCCATGGCGGCCTGGAGCCGCTGGAGGCGACGCTGGCCGGCGAGGCCGCCCGCTCCGCCCGCTTCTGGTTCGCGCCGGTCGACGCGGGCGAAGAGGACCGCGAGGCGGCGATCGTCTATGTCGTCGACACCACCGAGCAGCGCGCCCTGCAGGAGCAGTTCGCCCAGAGCCAGAAGATGCAGGCCGTCGGCCAGCTCGCCGGCGGCGTCGCGCACGACTTCAACAACGTGCTCGGCGCCATCATGCTGGCCGCCGACTTCCTCATCGCCAGCCACGGCCCGGGCGACCCGGCGTTCCAGGACATCATGTCCATCAAGAGCAACGCCAACCGCGCGGCCAACCTGGTGCGCCAGCTGCTCGCCTTCTCGCGCCGCCAGACGCTGCGCCCGCAGGTGCTGAACCTCAACGACGCGGTCTCGGACCTGTCGCTGCTGCTGCGCCGCCTGCTCGGCGAGAAGGTGGCGCTCGACGTGGTGCACGGGCGGGACCTCTGGCCGGTCAAGGCCGACGTCAACCAGTTCGAGCAGGTGGTGATGAATCTCGCGGTCAATGCGCGGGATTCCATGGCCAATGGCGGCAAGGTGCTGATCCGCACCCGCAACGTGGCGGCGGCCGAGACGGCGGCCTACGAGAAGAACGAGCTGCCGCGCGCCGACTATGTCGTGGTCGAGGTCGAGGACAGCGGCACCGGCATCCCGGCCGCGATCATGGACAAGATCTTCGAGCCGTTCTTCACCACCAAGGAGGTCGGCAAGGGCACCGGCCTCGGCCTCTCCACCGTCTACGGCATCGTCAAGCAGACCGGCGGATGGATCCTGGTCGATTCGGTCGAGGGCAAGGGCACGACCTTCCGCATCTTCCTGCCGCGGCATGTCGAGGCGGCGCAGCCGGCGGCGGCCGAGGGCGGCGCAGCCGCGGCGCCGGCGGGCGCGCCGGCCACGGCGCCGAAGCCCAAGGAGATGACCGACCTCACCGGGCGCGGGCGCATCCTCCTGGTCGAGGACGAGGAGGCGCTGCGGGCGCTCTCGGCCCGCACGCTGGTGGCGCGCGGCTTCGAGGTGATCGAGGCGAGCTCCGGCATCGACGCGCTGCAATTGCTGGAGGAGGCCGGCGGCCAGGTCGATCTTGTGGTCTCGGACGTGGTCATGCCGGAGATGGACGGGCCGACCCTGCTGAAGGAGCTGCGCAAGCGCAACACCACGGCCAAGATCATCTTCGTCTCCGGCTATGCCGAGGAAGCCTTCGAGCGCAACATGCCGCAGGGCGAGGTCTTCGCCTTCCTGCCCAAGCCCTTCTCGATGAAGCAGCTGGTCGAGGCGGTGAAGTCGAACATGGTGGCGTAG
PROTEIN sequence
Length: 857
MANGEGGGGQGFAIDRSERASRIKPVLVVVLAAALLAALAASTFLAKEQAESLVLGLLAILAAVGVVSLCMHAFGFMHFGQDGQVRNDLTKAIADGSPEGLVVTDKDGRVVYANAAYLAMTGATGEQDVRPVERAFTGDPDVSEPVYRLAQAARGGQTLTEEFRIAATPPAGGASWYRVRVRPMLRASGARDVVWTVADITRERERQENAFLELQHAIDYLDHAPAGFFSADPSGEIAYMNATLAGWLDFDLAQFGNGGLKLTDILPGNTGALIAAAPGEPGSVKTEIIDVDLRRRNGTILPVRLFHKVAFSADGHPGASRTLVIYRGPGGDVSEGLRAAEVRFARFFNNSPLAIATVDKDGRVIRTNAAFMRLFRGAFRGEAQGSPLVEGVAEREREGLGGLLKQATAGHGGLEPLEATLAGEAARSARFWFAPVDAGEEDREAAIVYVVDTTEQRALQEQFAQSQKMQAVGQLAGGVAHDFNNVLGAIMLAADFLIASHGPGDPAFQDIMSIKSNANRAANLVRQLLAFSRRQTLRPQVLNLNDAVSDLSLLLRRLLGEKVALDVVHGRDLWPVKADVNQFEQVVMNLAVNARDSMANGGKVLIRTRNVAAAETAAYEKNELPRADYVVVEVEDSGTGIPAAIMDKIFEPFFTTKEVGKGTGLGLSTVYGIVKQTGGWILVDSVEGKGTTFRIFLPRHVEAAQPAAAEGGAAAAPAGAPATAPKPKEMTDLTGRGRILLVEDEEALRALSARTLVARGFEVIEASSGIDALQLLEEAGGQVDLVVSDVVMPEMDGPTLLKELRKRNTTAKIIFVSGYAEEAFERNMPQGEVFAFLPKPFSMKQLVEAVKSNMVA*