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berkeley_reactor_200306_biofilm_scaffold_131489_1

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 3..1673

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent Clp protease n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JP40_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 556.0
  • Bit_score: 977
  • Evalue 4.60e-282
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 556.0
  • Bit_score: 979
  • Evalue 1.00e-282
clpB; ATP-dependent Clp protease similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 556.0
  • Bit_score: 977
  • Evalue 1.30e-282

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1671
GCGACCACGCTCGACGAGTACCGCAAGCATGTCGAGAAGGACGCGGCGCTCGCCCGGCGCTTCCAGCCGGTCTTCGTCTCCGAGCCCTCGGTCGAGGACACGGTGTCGATCCTGCGCGGCCTCAAGGAGAAATACGAGCTGCATCACGGCGTCAGGATCGCCGATTCCGCGCTGGTGGCCGCGGCGACCCTGTCGAACCGCTACATCACCGACCGCTTCCTGCCCGACAAGGCCATCGACCTCGTCGACGAGGCGGCGGCGCGGCTGAAGATGCAGGTCGATTCCAAGCCGGAGGAGCTGGATTCGCTCGATCGCGAGATCGTCCGGCTCAAGATCGAGCAGGAAGCCCTCAAGAAGGAGAGCGACGCCGGCTCCAGGAGCCGCCTGCAGGCGCTGGAGAAGGAGCTGGCCGGGCTGGAGAAGACATCGGCCGACATGACCTCGACATGGCAGGCGGAGAAGAGCAAGCTCTCCGACGCGCAGAAGATGAAGAGCGAGCTCGAGCAGCTGCGCACCGAGCTCGCCAACGCCCAGCGCCGGGGCGAATTCCAGCGGGCCGGCGAGCTGGCCTATGGCCGCATTCCAGAGCTGGAGAAGAAGCTCGCCGCGGTCGAGGCCAGCGGGAATTCCTCGATCGGCGAGACGGTGACCGCCGACAACATCGCGCAAGTCGTGTCACGCTGGACCGGTGTGCCAGTCGACCGCATGCTGGAGGGCGAGAAGGAGAAGCTGCTCCACATGGAGGAGGCGCTCGGCAAGCGCGTCGTCGGCCAGGCGCAGGCGGTGCGCGCGGTGTCGACGGCCGTGCGGCGCGCCCGCGCCGGGCTGCAGGATCCCCACCGGCCGATGGGCTCCTTCATGTTCCTCGGCCCGACCGGCGTCGGCAAGACCGAGCTCGCCAAGGCCCTGGCGGCCTTCCTGTTCGACAACGAGGCCGCCATGGTGCGCATCGACATGTCGGAGTTCATGGAAAAGCATTCGGTGGCGCGGCTGATCGGCGCGCCGCCCGGCTATGTCGGCTATGACGAGGGCGGGGCACTGACCGAGGCGGTGCGACGCCGGCCCTACCAGGTCGTGCTGTTCGACGAGATCGAGAAGGCGCATCCGGACGTGTTCAACGTCCTCCTGCAGGTTCTCGACGACGGCCGCCTGACCGACGGCCAGGGCCGCACCGTCGATTTCCGCAACACGCTGATCATCATGACCTCGAACATCGGCGCCGAGTACCTGGTGAACCAGCCGGAAGGCGAGAAGACCAGCGCGGTGCGCGACAAGGTCATGGCGATGGTGCGCGCGCATTTTCGCCCCGAGTTCCTCAACCGCATCGACGCCATCATCCTGTTCCACCGGCTGCAGAAGAGCGAAATGGGCCAGATCGTCGAAATCCAGTTCGAGCGCCTGCGCAAGCTCCTCGACGATCGCAAGATCGAGCTGTCGCTCGACGCCAAGGGACGGACCTGGCTCGCCGACAAGGGCTGGGATCCCGCCTATGGCGCGCGCCCTCTCAAGCGCGTCATCCAGCGCTACGTCCAGGACCCGCTGGCCGAGATGCTCCTCGCCGGCGACGTGCGCGACGGCTCGGCGATGAAGATCTCCGCCGGCAAGGAAGGGCTCACTTTCAACGGAAAGACGCCGGCGGCCGTCGAGGAGGACGAGCTGGACCCGGTCTGA
PROTEIN sequence
Length: 557
ATTLDEYRKHVEKDAALARRFQPVFVSEPSVEDTVSILRGLKEKYELHHGVRIADSALVAAATLSNRYITDRFLPDKAIDLVDEAAARLKMQVDSKPEELDSLDREIVRLKIEQEALKKESDAGSRSRLQALEKELAGLEKTSADMTSTWQAEKSKLSDAQKMKSELEQLRTELANAQRRGEFQRAGELAYGRIPELEKKLAAVEASGNSSIGETVTADNIAQVVSRWTGVPVDRMLEGEKEKLLHMEEALGKRVVGQAQAVRAVSTAVRRARAGLQDPHRPMGSFMFLGPTGVGKTELAKALAAFLFDNEAAMVRIDMSEFMEKHSVARLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNIGAEYLVNQPEGEKTSAVRDKVMAMVRAHFRPEFLNRIDAIILFHRLQKSEMGQIVEIQFERLRKLLDDRKIELSLDAKGRTWLADKGWDPAYGARPLKRVIQRYVQDPLAEMLLAGDVRDGSAMKISAGKEGLTFNGKTPAAVEEDELDPV*