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berkeley_reactor_200306_biofilm_scaffold_131489_9

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 11123..12070

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI00037A2E4B similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 312.0
  • Bit_score: 466
  • Evalue 2.00e-128
sugar ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 315.0
  • Bit_score: 466
  • Evalue 5.60e-129
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:AIC31099.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 315.0
  • Bit_score: 466
  • Evalue 2.80e-128

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Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGAAAGGACGCCTGTTCATCGCTTCGATGGCCGCAGGTCTGGCGATCGCGGCCTGGGGAGCCGCGCCGGCGCGCGCGGCGGACGAGCCTCGCTTCATCATGGTCACGCACGGCCAGGCCAACGACCCCTTCTGGTCCGTGGTCAAGAACGGCGCGAACGCGGCCGCCGCCGACGTGCATGTCGAGGTCGACTACCGCGCCCCCGAGACCTTCGACATGGTGGCGATGGGGCAGCTGATCGATGCGGCGGTCAACCAGAAGCCGGCCGGCCTGATCGTCACCATCCCCGACGCCTCGGCCCTCGGCCCCTCGATCCGCAAGGCCGTCGCCGCCGGCATTCCCGTCATCTCGATGAATTCCGGCTCCGACGTCTCCAAGGAATTCGGGGCGCTGCTGCATGTCGGGCAGGACGAATACGATGCCGGCAAGACCGCGGGCGAGAAGCTGAAGGCGCTCGGCGGCAAGGTCGGGCTCTGCGTCAATCACGAGGTCGGCAATGTGGCGCTCGACCTGCGCTGCAAGGGGTTTGCCGACGGCTTCGGCCAGACGGTGACGGTGCTGCCGACCTCCAACGACCCGAGCGAGATCCGCGCCAAGGTCAAGGCGGCTCTCGCCGCCCATGACGACATCGATTCCATCCTCGCCCTGGGCGCGTCCCTGGCGGGCGAGCCGACGGTCGCGGCCGTGGTCGATGCCGGCAAGGTGGGCAAGGTCCGGGTGGCGAGCTTCGACCTCTCGGCGAATTTCCTGAAGGCGGTCGCCGAGGGCAAGGCGGCCTTCGCCATCGATCAGCAGCAATATCTGCAGGGCTACCTGCCGGTAGTCTTCCTGGCCAACCTCGTCCGCTACGGCCTGATCCCGGGCGGCAACGTGCCCTCCGGCCCGAACCTGATCACCAAGGACAAGGCCGCCCTCGCGGTGGATCTTTCGGCCAAGGGAATCCGCTGA
PROTEIN sequence
Length: 316
MKGRLFIASMAAGLAIAAWGAAPARAADEPRFIMVTHGQANDPFWSVVKNGANAAAADVHVEVDYRAPETFDMVAMGQLIDAAVNQKPAGLIVTIPDASALGPSIRKAVAAGIPVISMNSGSDVSKEFGALLHVGQDEYDAGKTAGEKLKALGGKVGLCVNHEVGNVALDLRCKGFADGFGQTVTVLPTSNDPSEIRAKVKAALAAHDDIDSILALGASLAGEPTVAAVVDAGKVGKVRVASFDLSANFLKAVAEGKAAFAIDQQQYLQGYLPVVFLANLVRYGLIPGGNVPSGPNLITKDKAALAVDLSAKGIR*