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berkeley_reactor_200306_biofilm_scaffold_162782_1

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(103..1311)

Top 3 Functional Annotations

Value Algorithm Source
Beta-ketoadipyl CoA thiolase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DKX8_BRAJP similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 402.0
  • Bit_score: 729
  • Evalue 9.30e-208
Beta-ketoadipyl CoA thiolase {ECO:0000313|EMBL:BAR56686.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 402.0
  • Bit_score: 731
  • Evalue 4.50e-208
beta-ketoadipyl CoA thiolase similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 402.0
  • Bit_score: 729
  • Evalue 2.60e-208

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Taxonomy

Bradyrhizobium diazoefficiens → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1209
ATGGGCGACGTTTTTCTCTGTGATGCTGTCCGGACCCCGATCGGCCGTTTCGGCGGTTCGCTCGCCAAGGTGCGCGCCGACGATCTGGCCGCGGCGCCGATCAAGGCGTTGAAGGAGCGTAATCCCGGCGTCGACTGGACTGCCGTTGACGAAGTCTATTTCGGCTCGGCCAATCAGGCCGGCGAAGACAACCGCAACGTCGCGCGCATGGCGCTGCTGCTGGCGGGGCTGCCGGATTCGGTGCCGGGCCAGACCTTGAACCGGTTGTGCGCGTCGGGCCTCGACGCGGTTGGTGCGGCGGGCCGCGCCATTCGCGCCGGCGAAATCGATCTGGCGATTGCCGGCGGCGTCGAATCGATGACGCGCGCGCCGTTCGTGATGGGCAAGGCGACCTCCGCCTTCTCGCGCAGCGCCGAGGTGTTCGACACCACTATCGGCTGGCGCTTCATCAATCCGCTGCTGAAGGCGCAATACGGTGTCGATCCGATGCCGACCACCGGCGAGAATGTCGCCGAGGAATTCCAGGTGTCGCGCGCCGATCAGGACGCCTTCGCGATCCGCTCGCAGCAGCGCGCCGGCAAGGCCATCGCGAGCGGTTATTTCGCCGAGGAGATCACCCCGATCAGCATTCCCGGCGGCAAGGCCGGGCCGATCATCGTGGACGCCGACGAACATCCGCGCCCCGATACGACCATTGAGGCGCTCGCCAAGCTGAAGCCGATCGTGCGCGATCCGGGCACAGTGACCGCCGGCAATGCGTCGGGCGTCAACGACGGCGCGGCGGCGATGATCCTCGCCTCGGAAGCGGCGGTGAAGAAGCACGGCCTGACGCCGCGTGCGCGCATTCTCGGTCTCGCCTCGGCCGGCGTGCCGCCGCGCATCATGGGCATCGGCCCGGTGCCTGCCACGCGCAAGCTGATGGAGCGGCTGGGCCTGAAGATTTCCGACTTCGATTTGATCGAGCTCAACGAAGCCTTCGCGTCGCAGGGGATAGCCTGTCTCCGCCAATTGGGAGTGAAGGACGACGCCGATTTCGTCAACCCGCATGGCGGCGCTATCGCACTCGGGCATCCGCTCGGCATGAGCGGCGCGCGGCTGGCGATGACGGCGGTGCACGGCATGGAGAAGCGCGGCGGCAAGCTGGCGCTGGCGACGATGTGTGTCGGCGTCGGCCAGGGCGTGGCGATGGCGCTTGAGAAGCTGAACTGA
PROTEIN sequence
Length: 403
MGDVFLCDAVRTPIGRFGGSLAKVRADDLAAAPIKALKERNPGVDWTAVDEVYFGSANQAGEDNRNVARMALLLAGLPDSVPGQTLNRLCASGLDAVGAAGRAIRAGEIDLAIAGGVESMTRAPFVMGKATSAFSRSAEVFDTTIGWRFINPLLKAQYGVDPMPTTGENVAEEFQVSRADQDAFAIRSQQRAGKAIASGYFAEEITPISIPGGKAGPIIVDADEHPRPDTTIEALAKLKPIVRDPGTVTAGNASGVNDGAAAMILASEAAVKKHGLTPRARILGLASAGVPPRIMGIGPVPATRKLMERLGLKISDFDLIELNEAFASQGIACLRQLGVKDDADFVNPHGGAIALGHPLGMSGARLAMTAVHGMEKRGGKLALATMCVGVGQGVAMALEKLN*