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berkeley_reactor_200306_planktonic_scaffold_26574_8

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 11219..12454

Top 3 Functional Annotations

Value Algorithm Source
Carbohydrate-selective porin n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGZ8_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 410.0
  • Bit_score: 649
  • Evalue 2.10e-183
carbohydrate-selective porin similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 410.0
  • Bit_score: 649
  • Evalue 6.10e-184
Carbohydrate-selective porin {ECO:0000313|EMBL:AGA28537.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.9
  • Coverage: 410.0
  • Bit_score: 649
  • Evalue 3.00e-183

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1236
ATGGACCTCCGCGACGGCGAGGTCCAAAACCCGACCGACTCGGCCGACGGCCCGCCTCCGGCCGGTCCGTCGTTCGGGGTCACCGGGAATTGGTTTGGGGCGCGAGACGCACTGTTCGACAATGGGATTGATCTCCGTACTAACATCACGCAGTTCTATCAGGGGGTGACCGGCGGAGGCCTCGACCAGACCTTCCCATACGGGCTCAAGCTCGACTACTTTGGCACCGTCGAAGCCGAGAGGCTCTTCGGTTGGGAAGGGCTGTTCCTCAATCTCCACGGTGAAAGTCGATTCGGGCAGAGTGTCAACCGCAACGTCGGCTCCCTGATCCCCGCCAATTTTGCGATGGAGTTTCCTAAGCCGACGGGAAGCGCCTCGGCCCTGACCAACATGCAGATTGAACAGTTCCTAGGCCCTGATTTCGTCATCACATTCGGCAAGCTCAACGCAGCCGACGGCGTCAACATCCACCCCTTCCTGGGCGGCAACGGCATGAATCGCTTCATGAATGAAGCGTTCATTCTCAGCCCGATCTACGGCCACACCATTCCTTACTCGACCCCGGGCGCGGGCTTCAGCTATCTCCGGGAAAGTGACCCGCTATTCACTTTCTTCGTCCTCGACTCGAGTGGCAGCCCCGATACGAGCGGCCTGAGCCGGATGTTCCGGAATGGTGTGACCACGTTCGCCAGCCTTCGCGTGCCCGTGAGGCCCTTCGACTTGCCGGGTCACCAAACGCTGGAGATGGCCTATGCGACCGGTAAGTTCAGCCCACTCACGGAGGACGACTATGTCATCCTACCCCATACAGGACTCGTCCCACGCCCACACGCTAACGAGTATGTACTCACATACGGATTCGACCAGTTCCTCGCCGTCGACGCCGAAAACCCCAATAAGGGTTGGGGGATCTTCGCGAACACCAGCCTCGGCAATGAGCAAACCAACCCGATCCACTGGCTCCTCAATTTCGGAGCCGGAGGGACCAGCCCGCTGCCCGGCCGCACCGCGGACTCGTGGGGGGTGGGCTATTACTACCTGGGAATCAGTCACGTCCTTCGGGATGCATTTCAGCCCGTCTCTCCGATCCACAACGAACAGGGCTTTGAATTCTACTATAACGCGGCGATCTCCAATTGGTTCACCTTGGCGGCCGATGTCCAGGCCATTGATCCCGCCCAATCTGACGCTCGGTCGTCGTTCCTCTTCGGCCTGCGCCTGAAGATCGACCTCTAG
PROTEIN sequence
Length: 412
MDLRDGEVQNPTDSADGPPPAGPSFGVTGNWFGARDALFDNGIDLRTNITQFYQGVTGGGLDQTFPYGLKLDYFGTVEAERLFGWEGLFLNLHGESRFGQSVNRNVGSLIPANFAMEFPKPTGSASALTNMQIEQFLGPDFVITFGKLNAADGVNIHPFLGGNGMNRFMNEAFILSPIYGHTIPYSTPGAGFSYLRESDPLFTFFVLDSSGSPDTSGLSRMFRNGVTTFASLRVPVRPFDLPGHQTLEMAYATGKFSPLTEDDYVILPHTGLVPRPHANEYVLTYGFDQFLAVDAENPNKGWGIFANTSLGNEQTNPIHWLLNFGAGGTSPLPGRTADSWGVGYYYLGISHVLRDAFQPVSPIHNEQGFEFYYNAAISNWFTLAADVQAIDPAQSDARSSFLFGLRLKIDL*