ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_54258_4

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(4707..9251)

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AF0_SOLUE similarity UNIREF
DB: UNIREF100
  • Identity: 40.4
  • Coverage: 710.0
  • Bit_score: 485
  • Evalue 1.50e-133
Planctomycete cytochrome C domain secreted protein {ECO:0000313|EMBL:AGW45562.1}; TaxID=1403002 species="Bacteria; environmental samples.;" source="uncultured bacterium Lac161.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 694.0
  • Bit_score: 528
  • Evalue 2.20e-146
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 40.4
  • Coverage: 710.0
  • Bit_score: 485
  • Evalue 4.30e-134

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium Lac161 → Bacteria

Sequences

DNA sequence
Length: 4545
ATGGGGATCGTCGGCCGGCGTCGGTGGCTCGAGGGCGCGGGGGCGTTGGTGCTCGCGGGCCTGGCGTATGCTCTCGGCTTGGGGCGGTTGGGCATCGCTTTCGCCGATGGCGAGGCCGCTCGCGCGGCGGGCGGCGAGAAGCGCACCGTGAGCTTCCTCAAAGAGGTCCGCCCGATCCTGGCGCAGCATTGCTTCCAGTGTCACGGGCCCGACGAGGCCGCGCGCCGGGGGACGCTTCGCCTCGATCTGAAGGACGAGGCCCTCGCCGCGCGCGAGGGCCGGCACGTGATCGCACCGGGAGACCTGGAGGGCTCGCTCGTCTGGGAGCGGATGACCACCGATGACGACGACGCGCGGATGCCGCCCGCGGGGAAGGCGGAGCCGCTCACGGAGAAGCAGATCGCGACCGTGAAGGCGTGGATCGAGCAGGGTGCCGGGTGGGAAGACCATTGGTCGTTCCTCCCGCCGAAGAAGCCGGCGGTCCCCGACGTCTCCGACAAGGCGTGGGTGCGCGATCCGCTCGACGCGTTCGTGCTCGCACGGCTGGATCGCGAGCACCTCAAGCCGGAAGCCGAGGCGACCCGCGAGGCGTGGCTTCGCCGCGCCAGCTTCGACCTCACCGGGCTCCCGCCGACCCCCGCGGAGATCGACGCGTTCCTCGCGGACAAGCGTGCGGACGCGTTCGAGACGCGGGTGGACGGCCTCCTGAAGTCGAAGCGCTACGGCGAGCGCCAGGCGCAGGAGTGGCTCGACCTCGCCCGGTATGCGGACACGAGCGGCTACCAGGCCGACATGCCCCGCGAGATCTGGAAATGGCGAGAGTGGGTCATCAACGCCTTCAACGCCAACATGCCGTTCGATCAGTTCGCGATCGAGCAACTCGCGGGCGACCTCCTCCCCAACGCGACGCTCGCGCAGAAGGTGGCCACCGGCTTCAACCGCAATCACCCCACCAACAGCGAGGCGGGCGAGGAGGAGGATGAATACCGCTCCGCCTACGTGGTGGACCGCGTGAATACGACGGCGACGGCCTTCCTGGGCGTCACGCTCGCCTGCGCCCAGTGCCACGATCACAAGTACGACCCGATCAGTCAGCGGGATTATTACTCCTTCTATTCGTTCTTCAACAACATCAAGGAACGCGACTCCGAGTTCCGCGAGCCGAGGCCATCGATCCCCGTCCCCAACCCCGATCAAGAGCCCAGGCTCGTCGATCTGAAGGCCCGCATCGACGCCCTGAAGCTGCGCCTCGAGCGCGATGACTCCCTGACCGACGCGGCCCAAAAGGAATGGGAGCGTACGACGCTCGCCCGGCTCGCCAAGCCGATCGCGTGGACGACGGCGCCGCTGGCCGGGATGCTCTCGCGCGGCGGCTCGCAGTTGAAATCCCTCGAGGATGGCTCGATCCTTTCGACCGGCCCGGCGCCGGTCAAGGACACCTACGACGTCATGGTGCTCCCCGGGAAGAGGCGGATCACGGCCCTGCGGCTCGAGCTCCTGCCCGACGACACCGCCCCGGCGAAGGCGCTGGGACGCGCCTCCGACGGCCGCTTCACCCTGTCGGCGATCGAGATCCGCAACACGACGTTCTCCGAGGGCCAGGAGCCGCCGCTCGTCTACGTGTCCCGCGCCGAGGCCGACATCAACCAGAAGCCCAAGGAAGACCCCAACGTCTTCGACATGATGCCCGGCCCGATCGAATCGGCGATCGTCGTCGAGCCCGTGGGCGCGGGATCGGGAAATGGGCCGTTTGGCGGCTGGAGCATCGTCGGCGACGAGCGTAAGAAGCCGCACGAAGCGATCTTGCTCCCGCTCGATCCGATCGCCACGAATGAGGCGTCGGTGCTCCGGTTCTCGCTGCACCAGATGTCGCCCTTCAAATTCAAGAGCCTCATCGGCCGCTTCCGCATCAGCTACACCGAGGACGAGCGAATCCGCGAGCGGATGCTGCCGGCGCAGGCGAAGCTATGGAGCTCGATCGGACCATTCCCGGCGCAGGACGTCGCGAAGGCCTACGCGACGGCCTTCGAGCCGGAGAAGGATCTCACGGGCGAGCCGCTCGACCTGAAGAAGGGCTACGCGAAGGTCGTCCTCCCGCCCGAGGCGGCCAAGGACGGCGGCGATAAACCGGCACCGACCGCCGCGCCGGCAGCGGCCCAGAGTGATGGAAAACCCGAAGCCAAGAAAGCGACCGGCGAAGGGGCGACCCCGAAGCCCGAGCCGACGGCCAAACCGGGGGCCGAAGGGGCCAAGGAGGCCAAGGGCAACGCCGCCGGGGCCGCGGAGAAGCCCGCTGCTGAAGCCTCGAAGGACGGCAAGGGAGAGGCGAAGCCCGCGGCTGCGGCCGCGGTCGCGACCGTCGAGGCCAAGGCGGAGCCCAAGGCCGCCGCGGCCAAGCCCAAGCCCGAGAAAATCACCTGGGCCGAGCAACGGACGTGGCGCGACGGTGTCGCCGCACGCCTCCAGGGGGCGAACTCCGCCTATTACCTCACTCGCAAGATCACGTCGACGCGCCCTCGCACCGCGATGGTACAGATCGCCGGGCCGGCCGGCTTCCGGATGTGGGTTAACGGCGAGCTGGCCCAGACCTCGCTCCCGCCGACACCCTCGGCGCCCCCCAAGGCCGCCGACGCCAAGCCGATGGGCGCGGGGAACGGCCCCGAGGCGAAGGACAAGGACGACCAGGAGGAACAACCGGCCGCCCCCGAGATCAACGACGCGACCTCCGACGAGGCCACGGGCCGCGGCCGAAGCAGTCCGGAGAGGAAGTTCCGCATCGGCCTCCGCCAGGGCGAGAACGAGATCGTCGTGAAGGTCGTCCTGGGAGACGGTGCGGGCCCCGGTGGACGCCGCGCCGGCCCCGGCGGCGGTGCGATGGGCGGCGGCCCTCCCGGCGGTGGCATGTTCACCTTCGCTCTCACGCCGGAAGGCGACGACATCTTGACTCATGAGGTCGCGACGGCCCTCTGCCTCGAGGCCATGCAACCACCCCCGGCAGCATCCCCCGGCGCCAAGGCGTCCGCTCACCCCGCTGACCCGCCACCGTCCGGGACGGCGAGCGACACCGCCCCGGCGCAGGCACCGAAGCCCTCGGCGAACCCGTCCGGGGAGAAACCGTGGGCGGCAAAGGATGCCTCAGACCCGAAGCCCGGGCCGAACACGCGCGGCAGCCACGAAGCCCCCGCCTCGAACGCGGCCCGTGAGGCGAAGCCATCCGCGAAGCCGGCCTCGCCGCCGATGAAGGCCAGCCTCGTCGGCGAGCAATCCGCCCCGCCCAAGTCCGACGAGGCAGAGAACAAGCTCTCGCCCTCCGAGCGGCGAAAAAAGGTCCTGCGCGAATTCTACCGGTCGCAGATCGACCCCGTCGGGCGGATCGTCGCCGAGGAACTCTCCAAGCTCAAGGACGAGGAAAAACTCGTGAAACAACGACTCCCCAAGACGCTCGTCATGGAGGAGCTCGAAAAGCCTCGCCAGGCGTATGTGTTCAAGCGAGGCCTCTACAAGAATCGCGGCGAGGACGTCCAGCCCGCGACCCCGTCGGCACTGCCCCCGATGCCGAAGGGGGCGCCGCGGAACCGGCTCGGGCTCGCCCAGTGGCTCGTTTCCGGCCAGAACCCGTTGACCGCGCGCGTCCTGGTCAACCGCGTCTGGAAGCAGTATTTCGGGGCCGGGATCGTCAGGACGGCCGAGGACTTCGGCACCCGAGGCGAGCTTCCCACCCACCCCGAGCTCCTTGATTACCTGGCCGCCGAGCTGGTCGACGGCAAGTGGGACCTGAAGGCGCTTCACAAGAGCGTCGTGTTGTCGGCGACCTACCGCCAGGGATCGACGGCCTCGAAAGACAAGCTCGCCCGCGACCCCGAGAACCTCCTCCTCGCCCGAGGCCCTCGGCTCCGCCTGAGCGCCGAGATGATCCGCGACAACGCGCTGGCCGTCTCGGGGCTCCTGTTCGAGAAGATCGGCGGCGAGAGCGTCAAGCCGGTGCAGCCCAAGGACGCCTGGAAGACGGTCGAGGGTTTCGGGTCCGACTATCGGCGCGACCGCGGCGACAAGCAATACCGCCGCGCCCTCTACGTCTACTGGAAGCGCGGGACGCCCTATCCGTCCATGATCAACTTCGACGCGGTCAAGCGGGATAGTTGCACGGTGACGCGCGCCAGCACGACCACCCCCGTGCAGGCGCTCACGCTGCTCAACGATCCGGCCTACGTCGAATGCGCGAAGATGCTGGGTCAGAGGATGCTCAAGGACCGGGAAGCCCTCCGTCGCGCCCGCGACCTGAAGAAGCCCGAGGAGGACGCGAAGCGCCTCGCCTACGGGTTCCGCCTCTGCACGTCGCGCCCCCCGACCGAGCAGGAGTTGCGGATCCTGAATACGCTCCTCGTCGAGCAGCGTGCGCATTTCAAGGCCGATGTCGACTCGGCGAAGAAGCTCCTCGGCGTGGGCGACGCCAAGCTCGACGAGACCCTCGACCCCGCCGAGGCGGCGGCATGGGCGTGCGTCGGCAGCGCATTGATCAATCTCGACGCCACGATCCACCGCTGA
PROTEIN sequence
Length: 1515
MGIVGRRRWLEGAGALVLAGLAYALGLGRLGIAFADGEAARAAGGEKRTVSFLKEVRPILAQHCFQCHGPDEAARRGTLRLDLKDEALAAREGRHVIAPGDLEGSLVWERMTTDDDDARMPPAGKAEPLTEKQIATVKAWIEQGAGWEDHWSFLPPKKPAVPDVSDKAWVRDPLDAFVLARLDREHLKPEAEATREAWLRRASFDLTGLPPTPAEIDAFLADKRADAFETRVDGLLKSKRYGERQAQEWLDLARYADTSGYQADMPREIWKWREWVINAFNANMPFDQFAIEQLAGDLLPNATLAQKVATGFNRNHPTNSEAGEEEDEYRSAYVVDRVNTTATAFLGVTLACAQCHDHKYDPISQRDYYSFYSFFNNIKERDSEFREPRPSIPVPNPDQEPRLVDLKARIDALKLRLERDDSLTDAAQKEWERTTLARLAKPIAWTTAPLAGMLSRGGSQLKSLEDGSILSTGPAPVKDTYDVMVLPGKRRITALRLELLPDDTAPAKALGRASDGRFTLSAIEIRNTTFSEGQEPPLVYVSRAEADINQKPKEDPNVFDMMPGPIESAIVVEPVGAGSGNGPFGGWSIVGDERKKPHEAILLPLDPIATNEASVLRFSLHQMSPFKFKSLIGRFRISYTEDERIRERMLPAQAKLWSSIGPFPAQDVAKAYATAFEPEKDLTGEPLDLKKGYAKVVLPPEAAKDGGDKPAPTAAPAAAQSDGKPEAKKATGEGATPKPEPTAKPGAEGAKEAKGNAAGAAEKPAAEASKDGKGEAKPAAAAAVATVEAKAEPKAAAAKPKPEKITWAEQRTWRDGVAARLQGANSAYYLTRKITSTRPRTAMVQIAGPAGFRMWVNGELAQTSLPPTPSAPPKAADAKPMGAGNGPEAKDKDDQEEQPAAPEINDATSDEATGRGRSSPERKFRIGLRQGENEIVVKVVLGDGAGPGGRRAGPGGGAMGGGPPGGGMFTFALTPEGDDILTHEVATALCLEAMQPPPAASPGAKASAHPADPPPSGTASDTAPAQAPKPSANPSGEKPWAAKDASDPKPGPNTRGSHEAPASNAAREAKPSAKPASPPMKASLVGEQSAPPKSDEAENKLSPSERRKKVLREFYRSQIDPVGRIVAEELSKLKDEEKLVKQRLPKTLVMEELEKPRQAYVFKRGLYKNRGEDVQPATPSALPPMPKGAPRNRLGLAQWLVSGQNPLTARVLVNRVWKQYFGAGIVRTAEDFGTRGELPTHPELLDYLAAELVDGKWDLKALHKSVVLSATYRQGSTASKDKLARDPENLLLARGPRLRLSAEMIRDNALAVSGLLFEKIGGESVKPVQPKDAWKTVEGFGSDYRRDRGDKQYRRALYVYWKRGTPYPSMINFDAVKRDSCTVTRASTTTPVQALTLLNDPAYVECAKMLGQRMLKDREALRRARDLKKPEEDAKRLAYGFRLCTSRPPTEQELRILNTLLVEQRAHFKADVDSAKKLLGVGDAKLDETLDPAEAAAWACVGSALINLDATIHR*