ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_82209_8

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(10275..11852)

Top 3 Functional Annotations

Value Algorithm Source
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 519.0
  • Bit_score: 842
  • Evalue 2.40e-241
Methionine--tRNA ligase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DBR9_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 519.0
  • Bit_score: 842
  • Evalue 1.70e-241
methionyl-tRNA synthetase similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 519.0
  • Bit_score: 842
  • Evalue 4.80e-242

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1578
ATGACGGACGCGAAGAAGTTCTACATCACCACGGCGATCGACTACCCCAACAGCAGGCCACACATCGGGACCGCCTTCGAGAAGATCGGGGCCGATGTCCAGGCACGCTTCCGCCGGATGGAGGGCTTCGACGTCCACTTCCTCATGGGCAACGACGAGAACACGATCAAGGTCTCGCAACGCGCCGAGGAGCTGGGGGTCGCCCCCAAGCCGTACGTCGACGACATGGCCCGACAGTTCCGCGAAGTCTGGGACGCGCTCGAGATCTCCTACAACGACTTCATCCAGACGAGCGAGGACCGCCATCACGCGGGCTGCCAGAAGTTCATCCAGGCCGTCTACGACGCGGGCGACATCTACAAGAAGTCCTACACCGGGCTCTATTGCAACGGGTGCGAATCGTTCAAGACCGAGAAGGAAGTCGTCGACGGCCGGTGCCCGAACCACCCGAATACCCCCTTGCGCGAGATCGAGGAGGAGAACTACTTCTTCCGCCTCTCCGCATTCCGGGACCGGCTGCTCGCCCATTACGAGGCCAATCCCGACTTCATCCAGCCCGAAAGCCGCCGCAACGAGATCGTCAACCTCGTCCAGTCGGGCTTGCTGGACATCTCGATCAGCCGCAAGGGGTTCACCTGGGGCATCCCGGTCCCGTTCGACGCCGAGCAGACGATCTACGTTTGGTTCGACGCCCTGCTGAACTACATCACGGCGATCGGCTACGGGACCGCCGAGGACGCGTTCCGATCGCGATGGCCGGCGGACGTGCACGTCATCGGCAAGGACATCACTCGCTTCCACTGCGCCCTCTGGCCCGCGATGCTGATGTCGGCCGGCCTCGAGCTGCCCAGGCAGGTCTTCGGCCACGGGTTCGTCTACAACAAGGGGGCGAAGATCAGCAAGTCGGCGGGGACCGCCATCGACCCGATGGACGTCTACCGCCTGCACGGGGCCGACGCGTTCCGATATTACTTCATGAAAGAATGCCCGTTCGGGGGCGACGGGAACTTCAGCGAGGAGCGCTTCGCCGAGATCTACAACTCGGACCTGGCCGACAAGCTCGGGAACCTCTACAGCCGCACCCTCTCGATGTGCGTCAGGTACTTCGACGGCCGCCTGCCCGGCGCGGACGCCGTCGATTCGACCGCCTGGCTGGCGGGCCTCGACCTCGAAGGGCTCGTGGCGGACCTCCGCGAGCGCGTCGGCTCGTTCGAGTACAACCCTGCGCTGCAGCGGATCTGGCTCGAGGTCGTGGGCGCCGCCAACCGCTACATCGAGGACACCGCCCCCTTCAAGCTGGCGAAGACCGACCTGGAAGGGACGAAGGCGATCCTGATCAGCTGCGCCGAGGCGATCCGGGTCATCGCGATCCTGATCAAGCCCTTCATCCCCAGGACCGCCTCAACCTTCTACTCGGCATTCAACTTCGAGGACGCGGCCCCCTGGGACGCGGTGAGCTATCCGCATGCGTCGGCCCGGGTCTCGATCCCCGAGCTCCGGGTGACCGCGACGCTCACGGCAGGCAAGCCAACCCCCCTCTTCCCCAAGATCGAGCTGAAGGCCCCCGAGGCCAAATAA
PROTEIN sequence
Length: 526
MTDAKKFYITTAIDYPNSRPHIGTAFEKIGADVQARFRRMEGFDVHFLMGNDENTIKVSQRAEELGVAPKPYVDDMARQFREVWDALEISYNDFIQTSEDRHHAGCQKFIQAVYDAGDIYKKSYTGLYCNGCESFKTEKEVVDGRCPNHPNTPLREIEEENYFFRLSAFRDRLLAHYEANPDFIQPESRRNEIVNLVQSGLLDISISRKGFTWGIPVPFDAEQTIYVWFDALLNYITAIGYGTAEDAFRSRWPADVHVIGKDITRFHCALWPAMLMSAGLELPRQVFGHGFVYNKGAKISKSAGTAIDPMDVYRLHGADAFRYYFMKECPFGGDGNFSEERFAEIYNSDLADKLGNLYSRTLSMCVRYFDGRLPGADAVDSTAWLAGLDLEGLVADLRERVGSFEYNPALQRIWLEVVGAANRYIEDTAPFKLAKTDLEGTKAILISCAEAIRVIAILIKPFIPRTASTFYSAFNFEDAAPWDAVSYPHASARVSIPELRVTATLTAGKPTPLFPKIELKAPEAK*