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berkeley_reactor_200306_planktonic_scaffold_155414_7

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(6851..8440)

Top 3 Functional Annotations

Value Algorithm Source
leucine-rich repeat-containing protein typical subtype n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3FE8 similarity UNIREF
DB: UNIREF100
  • Identity: 30.3
  • Coverage: 380.0
  • Bit_score: 112
  • Evalue 9.30e-22
Uncharacterized protein {ECO:0000313|EMBL:CCQ91701.1}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.9
  • Coverage: 304.0
  • Bit_score: 104
  • Evalue 4.60e-19

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Taxonomy

Nitrospina gracilis → Nitrospina → Nitrospinales → Nitrospinia → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 1590
ATGAGCGACATTGGAGACGCTCTCAAGGGCGTGCTGGAGCGTCCCGGAGATCTCGCGGCGCGTCTGGACTATGCGAGCGTCCTCGAGGCTCAGGGCGATCCGCTCGGCGAGTTCATCCGCCTGGACTGCCGCCTCGCCTACGGCCCATCCGACGGAGACGACAGCCTCGCCTTGTGGGACCGGCGGCTCGCACTGCTCGAAGCCTACGCCGAATCCTGGCTCGCTCCTTTGGCGAAGTTTGCGGAATCGACGCACTTTCAACGAGGACTCGTCGAGTGGGTTCTCCTCGACGTCGACACCTACCTCGCCCATGGAGCGGAGATTTTCAGCCGATTTCCGGTCCGGTCGCTCGCCATTCGTGGAGTCCAAGGCCGGGTTGGCGAACTTCTCGCGAGCCCGTGGATTGACCAGATCGAATATCTATCGCTGCCCGAGCCAATACCCTCTGCCGACCAATCACGAAGATCAGGGGATTCGCCCTACGAAGGCTTGAGCGATGTCGACGTTGCAGAATTGTCCGCAACCGATCGACTTCCCAATCTTCGCGGCTGCAACCTGGGATGGAACCGAGAGCTTGGACCGCAGAGTGTCGACTCGATTCTTGGCGCGCCCTGGTGTGACCAACTCGAGTCGCTCAACCTCGAATGGACGGCGGCGGGCGACGAGGCCGCTTCGCTCATCGCCAGATCGGACCGCCTTGAGAACCTCAGGCGCTTGGACCTTTCTCGGACCGGGATCAGCTCGACCGGTGCCCGTGCCCTCGCCGACTCGCCGACCCTTGCCCGCCTGGGACTCACCGAGTTCGACTTCTCCTTGAATCACGATATCGACCCGGAAGGGAATGCGCGTTTGCTCCGTTCACCAGTCCTGGCCAGAGTTGGAACGGTGGGCCTGGAAGGAGCCATCGAGACCGAACTGGTCGATGCATTCGAACAGTCGGGTTCCCTGGGTTCCATGAAGGCTCTCAGGCTTGCGAATAGCTGGACCATCGATACGCCCTCGCTCCGTCGCCTGTCGCGGTGGCCGGGATTGGCCGGACTCGACAGCCTGACGTTCATCCTGAGCGGCCTCGGCGATGAGCAGCTTGAAAGCTTGGCGACATCGCCTTGGCTCGGAAAGTTGAAGTCGCTACGGTTATCCGAGACCAACGTGACGGATGTTGGCGTCGAGCGACTTTGCCGCTCGACGGCCTGGCTGGGGCTGGAGGAACTGGGGATTGACAGAAGCCCTCTGACGGATCGCTCCGTGCAAGCAATACTCGACGCGGGATGGTTTCCCAAACTCACGACACTCGACCTCCACGCCTCCTACTCCATTGGCGACGCCGGAGCGAGGTTGCTCGCCTCATACCAGAGTCAGACCCGGCTGCGAAGGCTGGTCCTCAGCATGGCGGGCATAGAGGACGCGGGGGCTTTGGCGCTCGCAGAAGCCCCCTTCGCTTCCCAACTCTGGACGCTCCGGCTCCGCGGTAACGAAGCGATTTCGCGGTCCACTTGCGATCTACTGAGGAAGCGATTCGGAGGAAGGGTTCACACCGAGCGGACGAGTAACAGGGACGGTTGGCGGAATTATCCTGAGACCCGGTGTTGA
PROTEIN sequence
Length: 530
MSDIGDALKGVLERPGDLAARLDYASVLEAQGDPLGEFIRLDCRLAYGPSDGDDSLALWDRRLALLEAYAESWLAPLAKFAESTHFQRGLVEWVLLDVDTYLAHGAEIFSRFPVRSLAIRGVQGRVGELLASPWIDQIEYLSLPEPIPSADQSRRSGDSPYEGLSDVDVAELSATDRLPNLRGCNLGWNRELGPQSVDSILGAPWCDQLESLNLEWTAAGDEAASLIARSDRLENLRRLDLSRTGISSTGARALADSPTLARLGLTEFDFSLNHDIDPEGNARLLRSPVLARVGTVGLEGAIETELVDAFEQSGSLGSMKALRLANSWTIDTPSLRRLSRWPGLAGLDSLTFILSGLGDEQLESLATSPWLGKLKSLRLSETNVTDVGVERLCRSTAWLGLEELGIDRSPLTDRSVQAILDAGWFPKLTTLDLHASYSIGDAGARLLASYQSQTRLRRLVLSMAGIEDAGALALAEAPFASQLWTLRLRGNEAISRSTCDLLRKRFGGRVHTERTSNRDGWRNYPETRC*