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berkeley_reactor_200306_planktonic_scaffold_12886_10

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 10523..11239

Top 3 Functional Annotations

Value Algorithm Source
Translation initiation factor IF-3 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF40_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 199.0
  • Bit_score: 276
  • Evalue 2.20e-71
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 199.0
  • Bit_score: 276
  • Evalue 3.10e-71
translation initiation factor IF-3 similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 208.0
  • Bit_score: 189
  • Evalue 7.60e-46

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 717
TTGAGCCACCCTTTTTCCTCGCGCAATTCAACTCCTGCCTCGTTCTTCCGGGTCAACGGCAAAATTCGTGCCCGCGAAGTCAGGGTCATTGGAGCCGACAACAAGCAAGTGGGCGTCGTGGCGCTCAACGAGGCGCTCAACATGGCGCGCCAGTTGGGCGTGGACCTCGTTGAAATCTCGCCCAATGCCCAGCCGCCCGTGTGCCGGCTCGTGGATTTCGGCAAGTTTCGTTACGAACAGGCCAAGAAAGACAAGGAATCGCGCAAACATCAGCACGCCTCGACCGTGAAGGAAGTGCAGTTGAGCCCGCGCATTGACCCGCATGACCTCAAAATCAAGGTCATGCACGCGGTGGACTTTCTCTGCGAGGACATGAAGGTCAAGGTGGCGCTGAAATTCCGCGGCCGCGAAATGGCCCACACGGAAATCGGCTTTGAAGTCGTCAACAAGTTCCTTGCCGAAATCGCGCCCTACGGCCATCCCGACTTCCAGCCCAAGCTGGTCGGACGCGCCATCAACCTGATGATCAGCCCGCTGCCGCGCAACAAACGCGCCAAAAATCCGCGCGCCGTCGAAGGCGAGGAGCCGGCCGCCCAGCCGTCGCAAACGCCGGAGAAACCGCACGAATCGCCGGCGGCCCGCCAAAAAGTCCCCGTCGCGGAACAGCCGCAATCCGGCGGCCTGAGCAATCCGTTCGCCAATCTGGACCTCAAGTAA
PROTEIN sequence
Length: 239
LSHPFSSRNSTPASFFRVNGKIRAREVRVIGADNKQVGVVALNEALNMARQLGVDLVEISPNAQPPVCRLVDFGKFRYEQAKKDKESRKHQHASTVKEVQLSPRIDPHDLKIKVMHAVDFLCEDMKVKVALKFRGREMAHTEIGFEVVNKFLAEIAPYGHPDFQPKLVGRAINLMISPLPRNKRAKNPRAVEGEEPAAQPSQTPEKPHESPAARQKVPVAEQPQSGGLSNPFANLDLK*