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berkeley_reactor_200306_planktonic_scaffold_49371_6

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 8432..12793

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.3
  • Coverage: 1497.0
  • Bit_score: 590
  • Evalue 3.40e-165
Autotransporter-associated beta strand repeat protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKS0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 33.3
  • Coverage: 1497.0
  • Bit_score: 590
  • Evalue 2.40e-165
family 6 carbohydrate binding protein similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 500.0
  • Bit_score: 351
  • Evalue 9.20e-94

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 4362
GTGGTTGTGATCTCCCGCTGTTTCACGCTTGGCTGGCTGGCATTCGTGGGAATTCTGCTGTCAGTCCAACCGGCCCGAGCCCTGACCAATAGCCTGGCACTCACGCCGCCGATGGGCTGGAACGACTGGAACAGTTATCACTGCGGCATCAGCGAGGAGGACGTTACCAACACGGCGGCGGTGATGGCCGCAAACGGCATGCAGGCCGCCGGGTATCGGTTCGTTAACATTGACGACGGCTGGGCCGGGGCGCGGGATTCCAATGGCGTCATTCAGGCCTATTCCGCTTCCGGCAAATTTCCGCATGGCATCAAGTGGCTGGCGGATGCTGTTCACTCCAGGGGAATGAAATTGGGCATTTACACCGACCACGGCACCAACACGTGTTCGCATTGCATCGGCACCAGCATCAGTCCCACCGGCAAACAGCCCGGCAGTTATGGTTACGAGTATGTGGATGCCTTCACTTACGCCAACTGGAACGTGGACTACCTGAAAGACGACAGTTGCAACCTGCCGCCCGGAGACGTTCCCTACGAGGATTATTTCCGCATGGCGGACGGGCTGATGAAGTCGGGCCACGACATCACCTTCAGCCTTTGTCCCAACCGGAGGCATTATGAGTATTGGGCGCCCGATGTCGGCAATCTCTGGCGGACGACGGGCGACATCGGCTCCACTTTTTCCAGCATGATTTCCAAGATTGACCAAAACAGCCGTTCGGCTTATCTCGCCGGACCCGGCCGGTGGAACGATGCGGACATGCTGGAAGTCGGGAACGGCGAATTTGCCACGAACCTCGTCGCGGCCCGGACGCATTTCACCATGTGGTGCATCATGGCGGCACCGTTGCTGGCGGGCAACAATGTCGCCACCATGTCGGCGGGCACCCTGGCCATCCTGACCAACGCAGAGGCCATTGCCGTGGACCAGGATCCGGCGGGCGAACAAGGAGAATTGGTGGGCGGCATCAAGGACAGCGCCGAAGTCTGGAGCAAACCGCTCGGTTACGATTTCACCACGCACGCGGTTGCCCTGCTCAATCGGAGCACGACTTCGCCGGCAACGATCACGTGTTACTGGACCAATCTGTTCTTTAAACCAGGCACACCGGCGACGGTGCGGGATCTGTGGGCGCACGCGGATCTGGGAACCTTCACAAACAGCTTCACCGCCACCATTCCACCTTACGGCTCGATGCTGCTGAAGCTGGTGGGCACCCCGGTCCCGCCGCCCGGCCCCGGCACCCATTACTTGGGCGATCTCCAACCGGTTTATGCTTACACCGGCTGGGGGACGCAAACGCAAGACCGCAGCATTGGCGGCAATCCGATTACCCTGAATGGCGTGGTTTACAGCCGGGGCATTGGAACGCACGCGATCGGCGGCCAGGAATACAATCTCGGCGGTGTCTGCTCGCGCTTTCACGCCGTTGTCGGTGTGGACGATGAAGTCGGGGCCGGCAAGGGTTCGGTCATTTTTCAAGTCCTTGCCGATGGCCGGAAAATCTACGACAGCGGCATCATGGCCGGCGGTGACATGCCCAAAACCGTGGAACTGGATATGACCGGCGTGCGGCGGTTGACGCTGGGCGTGACTGATACGGGGAATGACGGTTCCGGCAATCGCAATTCCTACGATCACTCTGATTGGGCGGACGCACTCGTCGTCGTGACGAACACCACGTCGCAAGTGCCGGAGAGGCCGGCAGGCCTGACGGCCAGCCCTGGCGATGCCATCACCTTGACATGGAACAATACTCTGGCTGCCATCCGCTACCATATCAAACGCTCCACGGTGAGCGGCACCGGCTACACAACCATCGCCAAGGTTCCGGTGGCTGCTTACACCGATACGAATGTCGTGCAGGGCGTGCGTTATTATTATGTCGTCTCGGCCGTGAGCAGCCTGGGCGAAAGCTCCAACTCGCTGGAGGTCAGCGCCAGCCCATGCGACATCCCATCTGCACCTGTCAACGTGACCACATCCGTGAGCAACACGACGGTCCTGGTCAGTTGGGCTCCGTCGGCCGGGGCGACCAGTTACATAGTCAGTCGTTTCACCGGTGACACACCACCCGCAGCGCTGGCGAATGTGACGACGATCAATTACACCGACACCAACACGGTGGCCGGGACGATTTACTATTATCTTGTCTCCGCCGCGAACGCCTGCAACCAAAGCGGGTATTCCTCATTTGCGGCGGCCAGGGCAACTGCGCCTCCGCCGGTTTATTCCACTTCATACTGGACCAACATCGTCACCTCCTCCATGCAAAGCTGGAATCTCAACGCCAACTGGACCAACAGCGATGTCTATCCCGATGCGCCCGGGGCCGCGGCCATGATCAACGCCAACATCCCGGGAGACCAAACGATCTCGCTGAATGGTCAAAACATCCGCATGGGAACCTTGTTGATCGGTGACCCAGATGGTTCCTCCCGTTATGCGATTGCGGCAAATGGCGGCTCTCTGATTTTTGACGGCGGCGTGAATGACGCCACACTGACGCAAATGGCCAGCAGCAAAGGAGACATCATTGCCGCCCCGATTGCGCTGGCGACGAAACTGGATGTGGTCAACAGTTCGACCAATGCCCTGGTCATTGCCGGTGATGTTTCCAGCGCGTCCGCAAGCTTGAACCTCGTCGGCGGCACGTTGCAAATTGGAAATGGTGCGATCAATGGTTCGCTTGGTGCCGTCAGCGTGACAGATAATGGCTCCCTGATTTTCAATCGCAGCGACAGCGTGGCAATGGCCGGAGCCATTTCCGGCAGCGGATCTGTTGCGCAACTGGGAACGGGCATTCTTACTTTAAGCGGTGCGAATTCCTTCTCCGGTGATGTGCGCGTTGAACACGGCACTTTGCGCGCCGGGAGCGGATCGGCTCTCGGCGACGCCAGCGGCATTACGGTGATCACCAACGGAGGCACATTGGATGTCAATGCGCAGGACTTGACCGGAGAAACGGTCATGGCGTCCGGCGCGGGTGTAAATGGTAATGGCGCGATTGTCAGCGGCGGCGGCCAGCAGACCCGGGCGTTGCGCAACGTCATTTTGACCGGCGACACGACGATCGGCGGCGCCGGCCCTTGGAATCCGGGCAACAACCAAAACCGCTGGGACATCCGGGCCGCTTCAAACTCTTCCACGAATGGCTGTTCATTGAGCACCGGTGGTCATCCCTACAAATTGATCAAGACAGGCGGCAACCAGGTTTCGCTGGTGGCGGTGTGCGTTGATCCCGAATTGGGCGACATTGACATCCAGCAAGGTTTGATGGGATGGGAGACGGCCACCAGCTCCATGGGCAATCCCGCCAGCAACCTTATCGTGCGCGCCGGGGCCACGCTGTCGTTTTACAACGCCGACACCGCCTGGAACAAACATTTCATTCTCTACGGCAATGGCGTGAGCACCAACCTGTATAACTGGAGCGGGGCGAACGTCATCATCGGTCCCGTGCAGTTGCACGGCGACTGCGTGTTCTGGGGCGGCGGCACCTCCCTGCTCCTGAGCAACGTCGTGAGTGGCACCGGCTCGCTCATCAAAAACGGAAGTTACAGCCTGCGGCTGGCCGCGCCCAATACCTACGTCGGCCAAACGGTGGTGAATGACGGAAGCCTGATCTTGCTGAACGCCGGTGCAATTGCCTCCAGTGCGACCGTGAACGTTGGCGCCGGCGCCGTTCTGGATGCCAGCGGCCGCAACGACGGCACATTCACGCTCGCTGCCGGTCAGACGCTCACGGGAAACGGTTCAGTGAATGGCGATGTTGTCGTCTCCGCTGGAGGCGTTCTAAAACCCGGAAATGCCGTCGGCACACTGGCGTTTAACAACAATCTCATCTTGAACAGCGGCAGCAGAACCGTGATGAAAATCGCCAAGTGGGTTTCCCCGTCAAATGATGTGGTGCAGGTGGCCGGCAATATCAATTACGGCGGCACACTGGCGGTGACCAATGTCGGCGGAATCCCGTTCGCGGCGGGTGACAGTTTCAAGCTGTTCAACGCGGCGGATTATTCCGGTGCGTTCACCCAGATCGCGCCGGCCATTCCTGCACTGAATCTTGCCTGGGATACCAATGGTTTGACGAACGGCATTCTGCGGGTGGTTTCCCTACCCACGCCGCCACCGAAATTCGGCGGGCTGAACTGGCGCGGCAACCAGCTCGTTTTCCGCGGCAGCAACGGCGTGCCGGGATGGATGTATTATTTGCTGGCGTCAACCAATCTTGGCCGGGCGCCCGCGCACTGGCGGGTCATCTCGACGAATAGCTTTGACCCGGAGGGAAATTTTATTTTCACCAACGCCGGCACCACCAACGTGCCGCAAATGTTTTACCGACTGGAATTGCCTTGA
PROTEIN sequence
Length: 1454
VVVISRCFTLGWLAFVGILLSVQPARALTNSLALTPPMGWNDWNSYHCGISEEDVTNTAAVMAANGMQAAGYRFVNIDDGWAGARDSNGVIQAYSASGKFPHGIKWLADAVHSRGMKLGIYTDHGTNTCSHCIGTSISPTGKQPGSYGYEYVDAFTYANWNVDYLKDDSCNLPPGDVPYEDYFRMADGLMKSGHDITFSLCPNRRHYEYWAPDVGNLWRTTGDIGSTFSSMISKIDQNSRSAYLAGPGRWNDADMLEVGNGEFATNLVAARTHFTMWCIMAAPLLAGNNVATMSAGTLAILTNAEAIAVDQDPAGEQGELVGGIKDSAEVWSKPLGYDFTTHAVALLNRSTTSPATITCYWTNLFFKPGTPATVRDLWAHADLGTFTNSFTATIPPYGSMLLKLVGTPVPPPGPGTHYLGDLQPVYAYTGWGTQTQDRSIGGNPITLNGVVYSRGIGTHAIGGQEYNLGGVCSRFHAVVGVDDEVGAGKGSVIFQVLADGRKIYDSGIMAGGDMPKTVELDMTGVRRLTLGVTDTGNDGSGNRNSYDHSDWADALVVVTNTTSQVPERPAGLTASPGDAITLTWNNTLAAIRYHIKRSTVSGTGYTTIAKVPVAAYTDTNVVQGVRYYYVVSAVSSLGESSNSLEVSASPCDIPSAPVNVTTSVSNTTVLVSWAPSAGATSYIVSRFTGDTPPAALANVTTINYTDTNTVAGTIYYYLVSAANACNQSGYSSFAAARATAPPPVYSTSYWTNIVTSSMQSWNLNANWTNSDVYPDAPGAAAMINANIPGDQTISLNGQNIRMGTLLIGDPDGSSRYAIAANGGSLIFDGGVNDATLTQMASSKGDIIAAPIALATKLDVVNSSTNALVIAGDVSSASASLNLVGGTLQIGNGAINGSLGAVSVTDNGSLIFNRSDSVAMAGAISGSGSVAQLGTGILTLSGANSFSGDVRVEHGTLRAGSGSALGDASGITVITNGGTLDVNAQDLTGETVMASGAGVNGNGAIVSGGGQQTRALRNVILTGDTTIGGAGPWNPGNNQNRWDIRAASNSSTNGCSLSTGGHPYKLIKTGGNQVSLVAVCVDPELGDIDIQQGLMGWETATSSMGNPASNLIVRAGATLSFYNADTAWNKHFILYGNGVSTNLYNWSGANVIIGPVQLHGDCVFWGGGTSLLLSNVVSGTGSLIKNGSYSLRLAAPNTYVGQTVVNDGSLILLNAGAIASSATVNVGAGAVLDASGRNDGTFTLAAGQTLTGNGSVNGDVVVSAGGVLKPGNAVGTLAFNNNLILNSGSRTVMKIAKWVSPSNDVVQVAGNINYGGTLAVTNVGGIPFAAGDSFKLFNAADYSGAFTQIAPAIPALNLAWDTNGLTNGILRVVSLPTPPPKFGGLNWRGNQLVFRGSNGVPGWMYYLLASTNLGRAPAHWRVISTNSFDPEGNFIFTNAGTTNVPQMFYRLELP*