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berkeley_reactor_200306_planktonic_scaffold_162563_8

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 6260..8419

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent DNA helicase RecQ n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSD9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 716.0
  • Bit_score: 977
  • Evalue 4.60e-282
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EEF57239.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.9
  • Coverage: 716.0
  • Bit_score: 977
  • Evalue 6.40e-282
ATP-dependent DNA helicase RecQ similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 602.0
  • Bit_score: 780
  • Evalue 4.00e-223

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2160
ATGCGTGATTCGCTGGCGGGCCGGGACGTGTTCGCGCTGCTGCCTACCGGCGGCGGCAAATCGCTTTGTTTCCAGCTTCCCGCCCTGGTGCGCGCCGGGCTCACCGTGGTGGTGTCGCCGCTCATCGCGCTGATGAAAGACCAGGTGGACGCGTTGCAGGCGGCCGGGGTGGCGGCGACGTTCCTGAATTCCTCGCTGGCCGCCGAGGAATCCCGCAAACGTCTGCGCGGCCTGCACAACGGCGAATTCCGCCTGCTCTACGTTGCGCCGGAGCGGCTGATGCTGTCGGGCTTCCTTGGCGATTTGCAGAAATGGAATGTGAACTTGTTCGCCATTGACGAGGCGCATTGCATCAGCGAATGGGGCCACGATTTTCGTCCCGAATACCGGCAGATCGCGCAACTCCGCGAGCGGTTTCCCCAGGTGCCGTTCATGGCGCTGACCGCCACCGCCACGGAACGCGTCCGCGCAGACATCGTCGCGCACTTGAAACTGCGCGAGCCGGCTTGCTACGTCGCCAGTTTCAACCGGCCCAACCTGACCTATCGCGTCATTCCCAAAAACAAGCCCTACGACCAGTTGCTGGACTTTCTGCGCGACCGGCCTGGCGACAGCGGCATTGTTTATTGTCAGTCGCGCAAAACGGCGGAACGCGTCGCGGCGAATCTTTCCGAAGACGGCGTGCCGGCCAGGCCGTATCACGCCGGACTCACGCCGAAGGAACGCAACGACCATCAGGAACTGTTTTTGCGCGACAACATCCGCGTGGTCTGCGCCACCATCGCCTTCGGCATGGGCATCAACAAGCCGAACGTCCGTTTCGTGGTTCACTATGATCTGCCGAAAAACATCGAGGGTTATTATCAGGAAACCGGCCGCGCCGGCCGCGACGGGCTGCCGGGCGAATGCGTGCTGCTGTTCAGCGTCGGCGACGTGGTGAAACAAACGCAGTTCATTGACGAAAAGCCCGATCCGCAGGAACAGAAAATTGCCCGCGAACAGTTGCAGCAAATGGTGCATTACGCCGAGTGCGCGGAATGCCGGCGCAAGGAATTGCTGGCGTATTTCGGCGAGGATTACGGAGCAGCGGATTCCGGTTCGGCGCAAGCCGAAATGACCGGCGACCACGCCGAGCCGGAGATGGGCGCGCCGAACTGCGGCGCGTGCGATAACTGTCTTTCGCCGCGCGCCACTTTCGACGGCACCATCGCCGCGCAGAAGTTTCTCTCGTGCGTCTATCGCATCCGCCAAAAAAGCGGGTTTGGCGTCGGGCTGATTCACGTGGTGGAAGTGCTCACCGGCGCGGACACGGAAAGAATCCGCAAATGGGATCACGCGCAGCTTTCCACCTACGGCATCGGCAAGGAACACAGCCGTCCCGAATGGGCGGCGATTGGCCGCGAGCTCGTCCGCCTCGGCCTGCTGCGCCAGACGAACGAAAAATTCAGCGTGCTGGAACTGACCGGCGAAGGTGGCCAGGCGCTGAAAGATCGGAGAAAAATCACGCTGACCAAGCCCGCCGTGGCCCCGGAAACCAAGGCGCATCACGTCGGCGAAATCACCTGCGACGAAGGCCTGTTCGCGCGCCTCCGCGCGTTGCGCAAAACGCTGGCGGACGAACGCGACGTGCCGGCTTACATCATTTTCTCCGACGTGGCGCTGCGGCAAATGGCGCGGAGTTATCCCGGCACCGACCGCGAATTTTCACGCATCAGCGGCGTGGGCGAAAAGAAGCTGCGCGAATTCGGCGCGATTTTTCTGGGCGAAATCGCCGCGTATTTGCAGACGAATCCGCGCCAGATTTTTGCGGACGATGCTTTCACCGTGCCGATTGTTTCACGGTCCTTGCGCAGCAGCCTCGGCGATTCCGCGCGGGAAACCTTGCGCCGTTTTCGCGTCGGGCAGAGCCTTGAGCAAATCGCCCGCGAACGCGGCGTGACCACCGGCACGGTTTTCGGTCATCTCGCGGAAGCCGTCGAGCAGGGTGAGTCGGTGGATTTGCAGCAATTTTTCACTGTGGCGGAACTCGCGGAAGTGGCCGCCGCCTTTGGCCGGCAAGGTTTCGGCGCGCTCGGGCCGGTGTTTGAATCGCTCGGCGGCAAAATGGATTATGGCCGGCTGCGTTTGTTCCGCGCGTCGGCAAACAGGCGTCGTTCCTGA
PROTEIN sequence
Length: 720
MRDSLAGRDVFALLPTGGGKSLCFQLPALVRAGLTVVVSPLIALMKDQVDALQAAGVAATFLNSSLAAEESRKRLRGLHNGEFRLLYVAPERLMLSGFLGDLQKWNVNLFAIDEAHCISEWGHDFRPEYRQIAQLRERFPQVPFMALTATATERVRADIVAHLKLREPACYVASFNRPNLTYRVIPKNKPYDQLLDFLRDRPGDSGIVYCQSRKTAERVAANLSEDGVPARPYHAGLTPKERNDHQELFLRDNIRVVCATIAFGMGINKPNVRFVVHYDLPKNIEGYYQETGRAGRDGLPGECVLLFSVGDVVKQTQFIDEKPDPQEQKIAREQLQQMVHYAECAECRRKELLAYFGEDYGAADSGSAQAEMTGDHAEPEMGAPNCGACDNCLSPRATFDGTIAAQKFLSCVYRIRQKSGFGVGLIHVVEVLTGADTERIRKWDHAQLSTYGIGKEHSRPEWAAIGRELVRLGLLRQTNEKFSVLELTGEGGQALKDRRKITLTKPAVAPETKAHHVGEITCDEGLFARLRALRKTLADERDVPAYIIFSDVALRQMARSYPGTDREFSRISGVGEKKLREFGAIFLGEIAAYLQTNPRQIFADDAFTVPIVSRSLRSSLGDSARETLRRFRVGQSLEQIARERGVTTGTVFGHLAEAVEQGESVDLQQFFTVAELAEVAAAFGRQGFGALGPVFESLGGKMDYGRLRLFRASANRRRS*