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berkeley_reactor_200306_planktonic_scaffold_220416_4

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 3604..4890

Top 3 Functional Annotations

Value Algorithm Source
Glycosyl hydrolase family 88 n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZX8_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 32.7
  • Coverage: 428.0
  • Bit_score: 230
  • Evalue 2.50e-57
glycoside hydrolase family protein similarity KEGG
DB: KEGG
  • Identity: 32.7
  • Coverage: 428.0
  • Bit_score: 230
  • Evalue 7.00e-58
Glycosyl hydrolase family 88 {ECO:0000313|EMBL:ACU02673.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.7
  • Coverage: 428.0
  • Bit_score: 230
  • Evalue 3.50e-57

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1287
ATGAAACCAATTCTCCCCGCCGTCGCGCCGCTGGCGTGCGCCCTTTTACTGGCGGCCGCTGCCGCCACGGGCGCTCCGGCCAAAATTGAACAGCAAAACTCCGCCGGCATCACGGACGCCGAAATCCGCGCCGTCGTCGCCCGGGTGGCACAACACCAGATTCATGAATTGAAGGACGGGGACTATCCTTCCGTCACGACGTCCAACGCGCTTGAAGCGGCCGGCCAGGCCGCCCGTCCCGCCGGCATTTCGTGGTCGTATCCGTGGGGCGTGACCCTGTATGGCCTGCTACGTTCGGTCAAACTCACCGGCGACGCGTCCGTGGAAACCTTCGTGCTGGAACACAACGCCATTTGCGCGCGCTATTATGAATGGCTGACGGATTTGCAGCGGCACCACGCCCAATCGCCGGAAGTTGCCGCGCTCGAAAAGCGTTCGAGCCTTCGCGCCCTGCTGCGGCTGGGAAACCTGGACAGTTGCGGCTCGATGGGAACCGAAATGCTGGTGGGCATGATGCGCCGGCCGGAGCAAGTGACGCCGGCCGAAAAAGCGGTGGTTGAACGCATCGCCGACTGGGTGGTGCACAAACAGGATCGCCTGCCGGACGGCACCTTGTGGCGTTCGCGGGCCATGGGCGGCACCGTCTGGCCGGATGATCTTTACATGGGCGGGGTTTTTCTCGCCCATTGGGGACAATACACCGGTGAACAAAAATACATTGATGACGCCGCCAGCCAGATCATTCATCAAGCCGCGCTGGAACAGGACGCGGACGGCCTTTGGTTTCATGGTTATTTCATGAGCGAAAAAAAGCACGCGCCATTCAAATGGGGACGCGGCAACAGTTGGGTCACGGTGGCGTTGGTGGAAACCCTTTCCGTGATGCCCGATAACGATCCGCTGCGCCCGCAGCTCCTGGACATTTTGCGCAAACAGATTGACGGCTTGAAAAAAGTCCAGGCGCCCGACGGCATGTGGCGTCAGGTTCTGGACCAGCCGGATCTCTGGGAGGAAACGTCCTGCACGGCGATGTTCGCCTACGGCATCGCGCGGGCGGTGAACCGCGGCTGGATTGACGCGTCGAACATGGAAGTCGCGCGCAAGGCGTTTGCCGGCATCGCCCAAAACGTGACGCCCGACGGCGTGGTCAAAGGCACGTGCCAGGGCACCAACATCGGGCGCGACTTGAGTTATTACATCAAGCGCCAGCGGCCCGATGATGATCTGCACGGCCGGGGCCCGGTTCTGCTCGCCGGAACGGAAATCCTGCTGGCCGGCAAAAAATAA
PROTEIN sequence
Length: 429
MKPILPAVAPLACALLLAAAAATGAPAKIEQQNSAGITDAEIRAVVARVAQHQIHELKDGDYPSVTTSNALEAAGQAARPAGISWSYPWGVTLYGLLRSVKLTGDASVETFVLEHNAICARYYEWLTDLQRHHAQSPEVAALEKRSSLRALLRLGNLDSCGSMGTEMLVGMMRRPEQVTPAEKAVVERIADWVVHKQDRLPDGTLWRSRAMGGTVWPDDLYMGGVFLAHWGQYTGEQKYIDDAASQIIHQAALEQDADGLWFHGYFMSEKKHAPFKWGRGNSWVTVALVETLSVMPDNDPLRPQLLDILRKQIDGLKKVQAPDGMWRQVLDQPDLWEETSCTAMFAYGIARAVNRGWIDASNMEVARKAFAGIAQNVTPDGVVKGTCQGTNIGRDLSYYIKRQRPDDDLHGRGPVLLAGTEILLAGKK*